BLASTX nr result

ID: Angelica22_contig00039003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00039003
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24213.3| unnamed protein product [Vitis vinifera]               84   1e-14
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    84   1e-14
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...    73   3e-11
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...    71   8e-11
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...    70   2e-10

>emb|CBI24213.3| unnamed protein product [Vitis vinifera]
          Length = 1539

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = -1

Query: 207  EALAPRAARNSKSYAEANLYAQANLPEKLNKRRKKSVEMQERFPKRRKADTASFSIPTIE 28
            +ALAPRAARN+KSYAEAN       PE+++KR+KK+ E QER  KRRKAD     +P IE
Sbjct: 996  DALAPRAARNTKSYAEANQ------PERISKRKKKAAEPQERAQKRRKADYLVHLVPRIE 1049

Query: 27   GAAAQVRGW 1
            GAAAQVRGW
Sbjct: 1050 GAAAQVRGW 1058


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
            vinifera]
          Length = 1764

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/69 (63%), Positives = 52/69 (75%)
 Frame = -1

Query: 207  EALAPRAARNSKSYAEANLYAQANLPEKLNKRRKKSVEMQERFPKRRKADTASFSIPTIE 28
            +ALAPRAARN+KSYAEAN       PE+++KR+KK+ E QER  KRRKAD     +P IE
Sbjct: 1193 DALAPRAARNTKSYAEANQ------PERISKRKKKAAEPQERAQKRRKADYLVHLVPRIE 1246

Query: 27   GAAAQVRGW 1
            GAAAQVRGW
Sbjct: 1247 GAAAQVRGW 1255


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
 Frame = -1

Query: 207  EALAPRAARNSKSYAEANLYAQANLPEKLNKRRKKSVEM---QERFPKRRKADTASFSIP 37
            +ALAPR+ARN+KSYAEAN +      E  NKR+KKS E+   QER  KRRK+D  + S+P
Sbjct: 1162 DALAPRSARNNKSYAEANHF------EGSNKRKKKSSEVLEPQERVLKRRKSDYTAPSVP 1215

Query: 36   TIEGAAAQVRGW 1
             IEGA+AQVR W
Sbjct: 1216 MIEGASAQVREW 1227


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/69 (53%), Positives = 48/69 (69%)
 Frame = -1

Query: 207  EALAPRAARNSKSYAEANLYAQANLPEKLNKRRKKSVEMQERFPKRRKADTASFSIPTIE 28
            EALAPR+ARN KSYAE +        E+ NKR+KK  E  E+ PKRRKA+ ++ ++P IE
Sbjct: 1212 EALAPRSARNIKSYAEVDP------SERSNKRKKKEPEPPEQVPKRRKAEYSAHAVPMIE 1265

Query: 27   GAAAQVRGW 1
            GA+ QVR W
Sbjct: 1266 GASVQVRNW 1274


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 2083

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/68 (57%), Positives = 46/68 (67%)
 Frame = -1

Query: 204  ALAPRAARNSKSYAEANLYAQANLPEKLNKRRKKSVEMQERFPKRRKADTASFSIPTIEG 25
            ALAPRAARN KSYAEA+        E+  KR+KK  E  ER PKRRKAD ++  I  I+G
Sbjct: 1522 ALAPRAARNIKSYAEADQ------SERSKKRKKKENEPTERIPKRRKADYSAHVISMIDG 1575

Query: 24   AAAQVRGW 1
            A+AQVR W
Sbjct: 1576 ASAQVRSW 1583


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