BLASTX nr result

ID: Angelica22_contig00038847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038847
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621555.1| F-box protein [Medicago truncatula] gi|35549...    55   6e-06
gb|ABD33336.2| Cyclin-like F-box; F-box protein interaction doma...    55   6e-06
ref|XP_003615467.1| F-box protein [Medicago truncatula] gi|35551...    55   8e-06

>ref|XP_003621555.1| F-box protein [Medicago truncatula] gi|355496570|gb|AES77773.1|
           F-box protein [Medicago truncatula]
          Length = 399

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
 Frame = +3

Query: 3   WNPATRQAKVIPT--FRDVHHEAL-----GFGYDVIDDDYKIVRVVM------------- 122
           WNP T++ KVIPT  F  V H  +     GFGYD + +DYKI+R VM             
Sbjct: 140 WNPTTQEFKVIPTSPFEFVPHMDVDILRHGFGYDCVTNDYKIIRQVMCYHKIDIDVYLLE 199

Query: 123 ---PPSFSEVYSVKRNVWRKVPDPIDTPLG-GDFDVCVNGFL 236
                 F E+YS++ N WRK+    D P+   +  VC++G +
Sbjct: 200 DIDNDHFWEIYSLRSNSWRKL--EYDIPINHKESGVCLDGMV 239


>gb|ABD33336.2| Cyclin-like F-box; F-box protein interaction domain; Galactose
           oxidase, central [Medicago truncatula]
          Length = 401

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 24/102 (23%)
 Frame = +3

Query: 3   WNPATRQAKVIPT--FRDVHHEAL-----GFGYDVIDDDYKIVRVVM------------- 122
           WNP T++ KVIPT  F  V H  +     GFGYD + +DYKI+R VM             
Sbjct: 142 WNPTTQEFKVIPTSPFEFVPHMDVDILRHGFGYDCVTNDYKIIRQVMCYHKIDIDVYLLE 201

Query: 123 ---PPSFSEVYSVKRNVWRKVPDPIDTPLG-GDFDVCVNGFL 236
                 F E+YS++ N WRK+    D P+   +  VC++G +
Sbjct: 202 DIDNDHFWEIYSLRSNSWRKL--EYDIPINHKESGVCLDGMV 241


>ref|XP_003615467.1| F-box protein [Medicago truncatula] gi|355516802|gb|AES98425.1|
           F-box protein [Medicago truncatula]
          Length = 278

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
 Frame = +3

Query: 3   WNPATRQAKVIPTFRDVHHEAL---GFGYDVIDDDYKIVRVV----MPPSFSEVYSVKRN 161
           WNPA  + KVIP  +      +   GF YD + DDYK+++ V          E+YS+K +
Sbjct: 48  WNPAPEKVKVIPPSQLEFSYGIMDHGFDYDHVRDDYKLIQYVDVVECHDPLWEIYSLKSD 107

Query: 162 VWRKVPDPIDTPLGGDFD-VCVNGFLCGIGD 251
            WRK+   ID P+  +FD VC+NG    +G+
Sbjct: 108 SWRKM--DIDMPIRINFDNVCLNGICHWLGE 136


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