BLASTX nr result

ID: Angelica22_contig00038669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038669
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|2...   288   1e-75
ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat...   286   5e-75
ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat...   286   5e-75
ref|XP_003591356.1| Pentatricopeptide repeat-containing protein ...   279   4e-73
ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat...   277   2e-72

>ref|XP_002310039.1| predicted protein [Populus trichocarpa] gi|222852942|gb|EEE90489.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  288 bits (737), Expect = 1e-75
 Identities = 149/225 (66%), Positives = 174/225 (77%), Gaps = 2/225 (0%)
 Frame = -1

Query: 673 FSLHSSTRYVNSTSISLFTNYPLHFHSLQTNQSTVNHNDIQT--VYNIICTSTNTNGMKQ 500
           F L  S RYV+S+ I         F SL TN    N+ DIQ   +YNII  ST++  +KQ
Sbjct: 11  FELQKS-RYVSSSKIP--------FLSLHTNPQNHNNKDIQVDAIYNIISNSTSSQNLKQ 61

Query: 499 SLKSSQIFLSNELIDNVLKKARFSHSNPKITLDFFNLTAQRRGFYHTSYSVDTMLYILGR 320
           SLKS+ +FLSN+LID VLK+ RFSH NP   LDFFN TA RRGFYH+SYS+DTMLYILGR
Sbjct: 62  SLKSTGVFLSNDLIDKVLKRVRFSHGNPLQALDFFNFTADRRGFYHSSYSLDTMLYILGR 121

Query: 319 NRRFKEIWEVLGEIKKKDQSLITPRTVMVVLGRVAKVCSVRFTVEMFRKFRRIVPVFGTE 140
           +R+F  IW+VL +IK+KD++LITPRT+ VVLGRVAKVCSVR TVE F KF+R+VPVF T 
Sbjct: 122 SRKFDHIWDVLIDIKRKDRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFKRLVPVFDTS 181

Query: 139 CYNGLLRTLCQEKSMIDARNVYHGLKHEFKPNLQTFNILLSGWKS 5
           C+N LLRTLCQEKSM DARNVYH LK  F+PNLQTFNILLSGWKS
Sbjct: 182 CFNALLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNILLSGWKS 226


>ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  286 bits (731), Expect = 5e-75
 Identities = 147/231 (63%), Positives = 179/231 (77%)
 Frame = -1

Query: 697 MLTNPQNLFSLHSSTRYVNSTSISLFTNYPLHFHSLQTNQSTVNHNDIQTVYNIICTSTN 518
           M+    N F   S  RY +   +S+F ++P  F S   NQS   H +I+TV+ II TS++
Sbjct: 1   MILRRPNFFQ--SPLRYFSPIPLSIFYSHP--FSSSTDNQSL--HQNIETVFRIITTSSS 54

Query: 517 TNGMKQSLKSSQIFLSNELIDNVLKKARFSHSNPKITLDFFNLTAQRRGFYHTSYSVDTM 338
           +  MK SL+SS++FLSNELID VLK+ RFSH NP   L+FFN TA+RRGFYHTS+SVDTM
Sbjct: 55  STDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTM 114

Query: 337 LYILGRNRRFKEIWEVLGEIKKKDQSLITPRTVMVVLGRVAKVCSVRFTVEMFRKFRRIV 158
           LYILGR+R+F +IW+VL ++K KD SLI+ RTVMVVLGR+AKVCSVR TVE FRKF++ V
Sbjct: 115 LYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFV 174

Query: 157 PVFGTECYNGLLRTLCQEKSMIDARNVYHGLKHEFKPNLQTFNILLSGWKS 5
           P F   C+N LLRTLCQEKSM+DARNVYHGLK  F+PNLQTFNILLSGWKS
Sbjct: 175 PEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGWKS 225


>ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Cucumis sativus]
          Length = 495

 Score =  286 bits (731), Expect = 5e-75
 Identities = 147/231 (63%), Positives = 179/231 (77%)
 Frame = -1

Query: 697 MLTNPQNLFSLHSSTRYVNSTSISLFTNYPLHFHSLQTNQSTVNHNDIQTVYNIICTSTN 518
           M+    N F   S  RY +   +S+F ++P  F S   NQS   H +I+TV+ II TS++
Sbjct: 1   MILRRPNFFQ--SPLRYFSPIPLSIFFSHP--FSSSTDNQSL--HQNIETVFRIITTSSS 54

Query: 517 TNGMKQSLKSSQIFLSNELIDNVLKKARFSHSNPKITLDFFNLTAQRRGFYHTSYSVDTM 338
           +  MK SL+SS++FLSNELID VLK+ RFSH NP   L+FFN TA+RRGFYHTS+SVDTM
Sbjct: 55  STDMKHSLESSRVFLSNELIDGVLKRVRFSHGNPLQALEFFNYTAKRRGFYHTSFSVDTM 114

Query: 337 LYILGRNRRFKEIWEVLGEIKKKDQSLITPRTVMVVLGRVAKVCSVRFTVEMFRKFRRIV 158
           LYILGR+R+F +IW+VL ++K KD SLI+ RTVMVVLGR+AKVCSVR TVE FRKF++ V
Sbjct: 115 LYILGRSRKFDKIWDVLLDVKFKDPSLISLRTVMVVLGRIAKVCSVRQTVESFRKFKKFV 174

Query: 157 PVFGTECYNGLLRTLCQEKSMIDARNVYHGLKHEFKPNLQTFNILLSGWKS 5
           P F   C+N LLRTLCQEKSM+DARNVYHGLK  F+PNLQTFNILLSGWKS
Sbjct: 175 PEFDVTCFNALLRTLCQEKSMMDARNVYHGLKSMFRPNLQTFNILLSGWKS 225


>ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480404|gb|AES61607.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 518

 Score =  279 bits (714), Expect = 4e-73
 Identities = 135/200 (67%), Positives = 163/200 (81%), Gaps = 1/200 (0%)
 Frame = -1

Query: 601 FHSLQTNQSTVNHND-IQTVYNIICTSTNTNGMKQSLKSSQIFLSNELIDNVLKKARFSH 425
           F S+    ST N ND +  VY I+ T+++   +KQSLKS+QIFLSNELID VLK+ RF H
Sbjct: 12  FTSILRRLSTFNPNDDVHKVYTILTTTSSPETLKQSLKSTQIFLSNELIDQVLKRVRFGH 71

Query: 424 SNPKITLDFFNLTAQRRGFYHTSYSVDTMLYILGRNRRFKEIWEVLGEIKKKDQSLITPR 245
           +NP  TL+FF  T +R+GFYHT+YS+DTMLYILGR+R F  +WE+L E ++KDQ++ITPR
Sbjct: 72  ANPNQTLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPR 131

Query: 244 TVMVVLGRVAKVCSVRFTVEMFRKFRRIVPVFGTECYNGLLRTLCQEKSMIDARNVYHGL 65
           TVMVVLGRVAKVCSVR TVE FRKF++IVP +G  C+N LLRTLCQEKSM DARNVYH L
Sbjct: 132 TVMVVLGRVAKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSL 191

Query: 64  KHEFKPNLQTFNILLSGWKS 5
           KH F+PNLQTFNILLSGWK+
Sbjct: 192 KHNFRPNLQTFNILLSGWKN 211


>ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g02420-like [Vitis vinifera]
          Length = 526

 Score =  277 bits (709), Expect = 2e-72
 Identities = 136/230 (59%), Positives = 180/230 (78%), Gaps = 8/230 (3%)
 Frame = -1

Query: 670 SLHSSTRYVNSTSISLFTNYPLHFHSLQTN--------QSTVNHNDIQTVYNIICTSTNT 515
           SL SS+RY  S S     + P +  S+ +         ++TV++ D++TV+ I+ ++++T
Sbjct: 14  SLQSSSRYAPSISTIGLNSNPQNPSSVFSRLYWSETIAETTVDNGDVETVFRIVSSASST 73

Query: 514 NGMKQSLKSSQIFLSNELIDNVLKKARFSHSNPKITLDFFNLTAQRRGFYHTSYSVDTML 335
             +KQSLKSS +FLSN+LID VLK+ RFSH NP   L FFN T +R+GFYHT +S+DTML
Sbjct: 74  RNLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQALAFFNYTNKRKGFYHTPFSLDTML 133

Query: 334 YILGRNRRFKEIWEVLGEIKKKDQSLITPRTVMVVLGRVAKVCSVRFTVEMFRKFRRIVP 155
           YILGR+RRF +IWE+L ++++KDQSLI+PR+V VVLGR+AKVCSV+ TVE FRKF+++VP
Sbjct: 134 YILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCSVKQTVESFRKFKKLVP 193

Query: 154 VFGTECYNGLLRTLCQEKSMIDARNVYHGLKHEFKPNLQTFNILLSGWKS 5
            F T C+N LLRTLCQEKSM DARNVYH LKH+F+P+L+TFNILLSGWKS
Sbjct: 194 EFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNILLSGWKS 243


Top