BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038667
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation spec...   109   3e-22
emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]   109   3e-22
ref|NP_176297.1| cleavage and polyadenylation specificity factor...   103   2e-20
ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arab...   103   3e-20
gb|AAL66977.1| putative cleavage and polyadenylation specificity...   101   1e-19

>ref|XP_003633408.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           3-I-like [Vitis vinifera]
          Length = 694

 Score =  109 bits (273), Expect = 3e-22
 Identities = 63/104 (60%), Positives = 69/104 (66%), Gaps = 26/104 (25%)
 Frame = -1

Query: 593 SVVALVLNASREMPNVVLES--------------------------DVKLGENGKLVTTV 492
           S+VALVLN SRE+P VV+ES                          DVKLGENG LV +V
Sbjct: 591 SIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISV 650

Query: 491 DGNVAHLDKLSGDVESENAGLKERVRIAFQRIQTNVKPIPLSTS 360
           DGNVAHLDK SG+VESEN GLKERVR+AFQRIQ  VKPIPLS S
Sbjct: 651 DGNVAHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 694


>emb|CAN71414.1| hypothetical protein VITISV_029216 [Vitis vinifera]
          Length = 687

 Score =  109 bits (273), Expect = 3e-22
 Identities = 63/104 (60%), Positives = 69/104 (66%), Gaps = 26/104 (25%)
 Frame = -1

Query: 593 SVVALVLNASREMPNVVLES--------------------------DVKLGENGKLVTTV 492
           S+VALVLN SRE+P VV+ES                          DVKLGENG LV +V
Sbjct: 584 SIVALVLNISREIPKVVVESEAIKTEEENGKKAEKVIHALLVSLFGDVKLGENGNLVISV 643

Query: 491 DGNVAHLDKLSGDVESENAGLKERVRIAFQRIQTNVKPIPLSTS 360
           DGNVAHLDK SG+VESEN GLKERVR+AFQRIQ  VKPIPLS S
Sbjct: 644 DGNVAHLDKQSGNVESENEGLKERVRVAFQRIQNAVKPIPLSVS 687


>ref|NP_176297.1| cleavage and polyadenylation specificity factor subunit 3-I
           [Arabidopsis thaliana] gi|30696512|ref|NP_849835.1|
           cleavage and polyadenylation specificity factor subunit
           3-I [Arabidopsis thaliana]
           gi|79320389|ref|NP_001031215.1| cleavage and
           polyadenylation specificity factor subunit 3-I
           [Arabidopsis thaliana]
           gi|75262219|sp|Q9C952.1|CPSF3_ARATH RecName:
           Full=Cleavage and polyadenylation specificity factor
           subunit 3-I; AltName: Full=Cleavage and polyadenylation
           specificity factor 73 kDa subunit I; Short=AtCPSF73-I;
           Short=CPSF 73 kDa subunit I
           gi|12323330|gb|AAG51638.1|AC018908_4 putative cleavage
           and polyadenylation specificity factor; 72745-70039
           [Arabidopsis thaliana] gi|23297661|gb|AAN13003.1|
           putative cleavage and polyadenylation specificity factor
           [Arabidopsis thaliana] gi|24415578|gb|AAN41458.1|
           putative cleavage and polyadenylation specificity factor
           73 kDa subunit [Arabidopsis thaliana]
           gi|222422865|dbj|BAH19419.1| AT1G61010 [Arabidopsis
           thaliana] gi|222423059|dbj|BAH19511.1| AT1G61010
           [Arabidopsis thaliana] gi|332195645|gb|AEE33766.1|
           cleavage and polyadenylation specificity factor subunit
           3-I [Arabidopsis thaliana] gi|332195646|gb|AEE33767.1|
           cleavage and polyadenylation specificity factor subunit
           3-I [Arabidopsis thaliana] gi|332195647|gb|AEE33768.1|
           cleavage and polyadenylation specificity factor subunit
           3-I [Arabidopsis thaliana]
          Length = 693

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/105 (55%), Positives = 69/105 (65%), Gaps = 27/105 (25%)
 Frame = -1

Query: 593 SVVALVLNASREMPNVVLES---------------------------DVKLGENGKLVTT 495
           S+VAL+LN SRE+P +V+E                            DVKLGENGKLV  
Sbjct: 589 SIVALILNISREVPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIR 648

Query: 494 VDGNVAHLDKLSGDVESENAGLKERVRIAFQRIQTNVKPIPLSTS 360
           VDGNVA LDK SG+VESE++GLKERVR+AF+RIQ+ VKPIPLS S
Sbjct: 649 VDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693


>ref|XP_002886569.1| hypothetical protein ARALYDRAFT_475225 [Arabidopsis lyrata subsp.
           lyrata] gi|297332410|gb|EFH62828.1| hypothetical protein
           ARALYDRAFT_475225 [Arabidopsis lyrata subsp. lyrata]
          Length = 693

 Score =  103 bits (256), Expect = 3e-20
 Identities = 58/105 (55%), Positives = 69/105 (65%), Gaps = 27/105 (25%)
 Frame = -1

Query: 593 SVVALVLNASREMPNVVLES---------------------------DVKLGENGKLVTT 495
           S+VAL+LN SRE+P +V+E                            DVKLGENGKLV  
Sbjct: 589 SIVALILNISREVPKIVVEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIR 648

Query: 494 VDGNVAHLDKLSGDVESENAGLKERVRIAFQRIQTNVKPIPLSTS 360
           VDGNVA LDK SG+VESE++GLKERVR+AF+RIQ+ VKPIPLS S
Sbjct: 649 VDGNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693


>gb|AAL66977.1| putative cleavage and polyadenylation specificity factor
           [Arabidopsis thaliana]
          Length = 693

 Score =  101 bits (251), Expect = 1e-19
 Identities = 57/105 (54%), Positives = 68/105 (64%), Gaps = 27/105 (25%)
 Frame = -1

Query: 593 SVVALVLNASREMPNVVLES---------------------------DVKLGENGKLVTT 495
           S+VAL+LN SRE+P +V+E                            DVKLGENGKLV  
Sbjct: 589 SIVALILNISREVPKIVMEEEDAVKSEEENGKKVEKVIYALLVSLFGDVKLGENGKLVIR 648

Query: 494 VDGNVAHLDKLSGDVESENAGLKERVRIAFQRIQTNVKPIPLSTS 360
           VD NVA LDK SG+VESE++GLKERVR+AF+RIQ+ VKPIPLS S
Sbjct: 649 VDSNVAQLDKESGEVESEHSGLKERVRVAFERIQSAVKPIPLSAS 693