BLASTX nr result
ID: Angelica22_contig00038660
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00038660
(416 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha... 213 1e-53
ref|XP_002518733.1| polyadenylate-binding protein, putative [Ric... 213 1e-53
ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|2... 213 1e-53
gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana taba... 213 2e-53
ref|XP_002313862.1| predicted protein [Populus trichocarpa] gi|2... 212 3e-53
>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 213 bits (543), Expect = 1e-53
Identities = 98/139 (70%), Positives = 125/139 (89%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRVMFSNRDPSMRTS-SGNIFVKNLDKSVDN 178
GYGYVNY + +DAARA E+LN+T ++GK IR+M+SNRDP++R S +GNIF+KNLDK++D+
Sbjct: 69 GYGYVNYGNPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDH 128
Query: 179 KGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQVFVG 358
K LHDTFS +GNILSCK+A DSSGQSKGYGFVQYDS+E AQKAIE+LNG+L+NDKQV+VG
Sbjct: 129 KALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVG 188
Query: 359 PFLSKQERELAADRLKFTN 415
PF+ KQER++A D+ +FTN
Sbjct: 189 PFVRKQERDMAVDKTRFTN 207
Score = 87.0 bits (214), Expect = 1e-15
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 17/143 (11%)
Frame = +2
Query: 5 YGYVNYCDAEDAARAKEMLNYTAINGKTIRV----MFSNRDPSMR------------TSS 136
+G+VN+ +AEDAARA E LN ++ K V S R+ ++ S
Sbjct: 248 FGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQ 307
Query: 137 G-NIFVKNLDKSVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIE 313
G N+++KNLD S+ + L + FS YG I SCK+ D SG SKG GFV + + E A +A+
Sbjct: 308 GLNLYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALS 367
Query: 314 QLNGVLINDKQVFVGPFLSKQER 382
++NG ++ K ++V K+ER
Sbjct: 368 EMNGKMVVSKPLYVALAQRKEER 390
Score = 85.9 bits (211), Expect = 3e-15
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRV----MFSNRDPSM-RTSSGNIFVKNLDK 166
GYG+V Y E A +A E LN +N K + V RD ++ +T N+FVKNL +
Sbjct: 156 GYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMAVDKTRFTNVFVKNLSE 215
Query: 167 SVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQ 346
S + L F +G I S + D G+S+ +GFV +++ E A +A+E LNG +++K
Sbjct: 216 STLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKD 275
Query: 347 VFVGPFLSKQEREL 388
FVG K ERE+
Sbjct: 276 WFVGRAQKKSEREM 289
>ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding
protein, putative [Ricinus communis]
Length = 644
Score = 213 bits (542), Expect = 1e-53
Identities = 100/139 (71%), Positives = 121/139 (87%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRVMFSNRDPSMRTS-SGNIFVKNLDKSVDN 178
GYGYVNY +DAARA +MLN+T +NG IR+M+S+RDPS+R S SGNIF+KNLDK +D+
Sbjct: 66 GYGYVNYSSPQDAARALDMLNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDH 125
Query: 179 KGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQVFVG 358
K LHDTFS +GNILSCK+ATDSSGQSKGYGFVQ+D+EE AQKAIE+LNG+L+NDKQV+VG
Sbjct: 126 KALHDTFSAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVG 185
Query: 359 PFLSKQERELAADRLKFTN 415
PFL KQERE A D+ +F N
Sbjct: 186 PFLRKQERESAIDKTRFNN 204
Score = 85.1 bits (209), Expect = 5e-15
Identities = 47/133 (35%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRV----MFSNRDPSM-RTSSGNIFVKNLDK 166
GYG+V + + E A +A E LN +N K + V R+ ++ +T N++VKNL +
Sbjct: 153 GYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAIDKTRFNNVYVKNLSE 212
Query: 167 SVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQ 346
+ + L F YG I S + D G++K +GFV +++ + A A+E LNG +DK+
Sbjct: 213 TTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVNFENADDAATAVEALNGKKFDDKE 272
Query: 347 VFVGPFLSKQERE 385
FVG K ERE
Sbjct: 273 WFVGKAQKKNERE 285
Score = 81.6 bits (200), Expect = 6e-14
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Frame = +2
Query: 5 YGYVNYCDAEDAARAKEMLNYTAINGKT-----------------IRVMFSNRDPSMRTS 133
+G+VN+ +A+DAA A E LN + K +R S ++ + +
Sbjct: 245 FGFVNFENADDAATAVEALNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQ 304
Query: 134 SGNIFVKNLDKSVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIE 313
N+++KNLD S+ + L FS +G I SCK+ D +G S+G GFV + + E A KA+
Sbjct: 305 GANLYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALM 364
Query: 314 QLNGVLINDKQVFVGPFLSKQER 382
++NG ++ K ++V K++R
Sbjct: 365 EMNGKMVVSKPLYVALAQRKEDR 387
>ref|XP_002300227.1| predicted protein [Populus trichocarpa] gi|222847485|gb|EEE85032.1|
predicted protein [Populus trichocarpa]
Length = 644
Score = 213 bits (542), Expect = 1e-53
Identities = 99/139 (71%), Positives = 123/139 (88%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRVMFSNRDPSMRTS-SGNIFVKNLDKSVDN 178
GYGYVNY + +DAARA EMLN+T +NG IRVM+S+RDP++R S +GNIF+KNLDK++D+
Sbjct: 67 GYGYVNYSNPQDAARALEMLNFTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDH 126
Query: 179 KGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQVFVG 358
K LHDTFS +GNILSCK+ATD SGQSKGYGFVQ+DSEE AQKAIE+LNG+L+NDKQV+VG
Sbjct: 127 KALHDTFSAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVG 186
Query: 359 PFLSKQERELAADRLKFTN 415
PFL KQER+ A D+++F N
Sbjct: 187 PFLRKQERDTATDKMRFNN 205
Score = 91.3 bits (225), Expect = 7e-17
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRVMFSNRDPSMRTSS-----GNIFVKNLDK 166
GYG+V + E A +A E LN +N K + V R T++ N+FVKNL +
Sbjct: 154 GYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATDKMRFNNVFVKNLSE 213
Query: 167 SVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQ 346
+ + L+ TF +G I S + D G+SK +GFV +++ E A KA+E LNG I+DK+
Sbjct: 214 TTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDAAKAVEALNGKKIDDKE 273
Query: 347 VFVGPFLSKQEREL 388
FVG K ERE+
Sbjct: 274 WFVGKAQKKYEREV 287
Score = 83.2 bits (204), Expect = 2e-14
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Frame = +2
Query: 5 YGYVNYCDAEDAARAKEMLNYTAINGKTI-----------------RVMFSNRDPSMRTS 133
+G+VN+ +AEDAA+A E LN I+ K R S ++ + +
Sbjct: 246 FGFVNFENAEDAAKAVEALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQ 305
Query: 134 SGNIFVKNLDKSVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIE 313
N+++KNLD S+ ++ L + FS +G I SCK+ D +G S+G GFV + + E A +A+
Sbjct: 306 GANLYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALL 365
Query: 314 QLNGVLINDKQVFVGPFLSKQER 382
++NG ++ K ++V K++R
Sbjct: 366 EMNGKIVVSKPLYVALAQRKEDR 388
>gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 213 bits (541), Expect = 2e-53
Identities = 98/139 (70%), Positives = 124/139 (89%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRVMFSNRDPSMRTS-SGNIFVKNLDKSVDN 178
GYGYVNY + +DAARA E+LN+T ++GK IR+M+SNRDP++R S +GNIF+KNLDK++D+
Sbjct: 69 GYGYVNYGNPQDAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNGNIFIKNLDKAIDH 128
Query: 179 KGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQVFVG 358
K LHDTFS +GNILSCK+A DSSGQSKGYGFVQYDSEE AQKAIE+LNG+L+NDKQV+VG
Sbjct: 129 KALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVG 188
Query: 359 PFLSKQERELAADRLKFTN 415
PF+ K ER++A D+ +FTN
Sbjct: 189 PFVRKHERDMAVDKTRFTN 207
Score = 89.0 bits (219), Expect = 4e-16
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 17/143 (11%)
Frame = +2
Query: 5 YGYVNYCDAEDAARAKEMLNYTAINGKTI-----------------RVMFSNRDPSMRTS 133
+G+VN+ +AEDAARA E LN ++ K R S ++ ++
Sbjct: 248 FGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQ 307
Query: 134 SGNIFVKNLDKSVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIE 313
N+++KNLD S+ ++ L + FS YG I SCK+ D SG SKG GFV + + E A +A+
Sbjct: 308 GLNLYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALS 367
Query: 314 QLNGVLINDKQVFVGPFLSKQER 382
++NG ++ K ++V K+ER
Sbjct: 368 EMNGKMVVSKPLYVALAQRKEER 390
Score = 85.1 bits (209), Expect = 5e-15
Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRV----MFSNRDPSM-RTSSGNIFVKNLDK 166
GYG+V Y E A +A E LN +N K + V RD ++ +T N+FVKNL +
Sbjct: 156 GYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMAVDKTRFTNVFVKNLSE 215
Query: 167 SVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQ 346
S + L F +G I S + D G+S+ +GFV +++ E A +A+E LNG +++K
Sbjct: 216 STLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKD 275
Query: 347 VFVGPFLSKQEREL 388
FVG K ERE+
Sbjct: 276 WFVGRAQKKSEREM 289
>ref|XP_002313862.1| predicted protein [Populus trichocarpa] gi|222850270|gb|EEE87817.1|
predicted protein [Populus trichocarpa]
Length = 642
Score = 212 bits (539), Expect = 3e-53
Identities = 99/139 (71%), Positives = 122/139 (87%), Gaps = 1/139 (0%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRVMFSNRDPSMRTS-SGNIFVKNLDKSVDN 178
GYGYVNY + +DAARA E+LN+T +NG IRVM+S+RDPS+R S +GNIF+KNLDK++D+
Sbjct: 67 GYGYVNYSNPQDAARALEVLNFTPVNGSPIRVMYSHRDPSVRKSGAGNIFIKNLDKAIDH 126
Query: 179 KGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQVFVG 358
K LHDTFS +GNILSCK+ATD SGQSKGYGFVQ+DSEE AQKAIE+LNG+L+NDKQV+VG
Sbjct: 127 KALHDTFSVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVG 186
Query: 359 PFLSKQERELAADRLKFTN 415
PFL KQER+ A D+ +F N
Sbjct: 187 PFLRKQERDTATDKTRFNN 205
Score = 85.1 bits (209), Expect = 5e-15
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 5/134 (3%)
Frame = +2
Query: 2 GYGYVNYCDAEDAARAKEMLNYTAINGKTIRV----MFSNRDPSM-RTSSGNIFVKNLDK 166
GYG+V + E A +A E LN +N K + V RD + +T N+FVKNL +
Sbjct: 154 GYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATDKTRFNNVFVKNLSE 213
Query: 167 SVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIEQLNGVLINDKQ 346
+ + L+ F +G I S + D G+S+ +GFV +++ + A KA E LNG +DK+
Sbjct: 214 TTAEEDLNKAFGEFGTITSVVVMRDGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKE 273
Query: 347 VFVGPFLSKQEREL 388
FVG K ERE+
Sbjct: 274 WFVGKAQKKYEREV 287
Score = 81.6 bits (200), Expect = 6e-14
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Frame = +2
Query: 5 YGYVNYCDAEDAARAKEMLNYTAINGKTI-----------------RVMFSNRDPSMRTS 133
+G+VN+ +A+DAA+A E LN + K R S ++ + +
Sbjct: 246 FGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQ 305
Query: 134 SGNIFVKNLDKSVDNKGLHDTFSTYGNILSCKIATDSSGQSKGYGFVQYDSEEGAQKAIE 313
N+++KNLD S+ ++ + + FS +G I SCK+ D +G S+G GFV + + E A +A+
Sbjct: 306 GANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALL 365
Query: 314 QLNGVLINDKQVFVGPFLSKQERELAADRLK 406
++NG ++ K ++V K++R LK
Sbjct: 366 EMNGKMVASKPLYVALAQRKEDRRARLSFLK 396