BLASTX nr result

ID: Angelica22_contig00038628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038628
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   193   1e-47
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   192   3e-47
emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]         192   3e-47
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   192   3e-47
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         191   4e-47

>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  193 bits (491), Expect = 1e-47
 Identities = 94/174 (54%), Positives = 122/174 (70%), Gaps = 23/174 (13%)
 Frame = +1

Query: 28   EPVCFEQAIADGVWKEAMEKEISAIEKNKTWELTTLPKGHKAIDLKWVLKVKKYQNGEV- 204
            EP+ F++AI    W+ AM++EI +I+KN TWELT+LP GHKAI +KWV K KK   GEV 
Sbjct: 805  EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVE 864

Query: 205  ----------------------FAPVTRLETVRLLLALAAKNDWEVHHLDVKSAFLNGVL 318
                                  FAPV RLETVRL+++LAA+N W++H +DVKSAFLNG L
Sbjct: 865  RYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 924

Query: 319  LEEVYVRQPKGFVKKGDEDKVYRLLKALYGLRQAPRAWYSRLNQYLLQLGFIKC 480
             EEVY+ QP+G++ KG+EDKV RL KALYGL+QAPRAW +R+++Y  +  FIKC
Sbjct: 925  EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKC 978


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/174 (53%), Positives = 121/174 (69%), Gaps = 23/174 (13%)
 Frame = +1

Query: 28   EPVCFEQAIADGVWKEAMEKEISAIEKNKTWELTTLPKGHKAIDLKWVLKVKKYQNGEV- 204
            EP+ F++AI    W+ AM++EI +I+KN TWELT+LP GHK I +KWV K KK   GEV 
Sbjct: 837  EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVE 896

Query: 205  ----------------------FAPVTRLETVRLLLALAAKNDWEVHHLDVKSAFLNGVL 318
                                  FAPV RLETVRL+++LAA+N W++H +DVKSAFLNG L
Sbjct: 897  RYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956

Query: 319  LEEVYVRQPKGFVKKGDEDKVYRLLKALYGLRQAPRAWYSRLNQYLLQLGFIKC 480
             EEVY+ QP+G++ KG+EDKV RL KALYGL+QAPRAW +R+++Y  +  FIKC
Sbjct: 957  EEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKC 1010


>emb|CAA69272.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 623

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/174 (53%), Positives = 121/174 (69%), Gaps = 23/174 (13%)
 Frame = +1

Query: 28  EPVCFEQAIADGVWKEAMEKEISAIEKNKTWELTTLPKGHKAIDLKWVLKVKKYQNGEV- 204
           EP+ F++AI    W+ AM++EI +I+KN TWELT+LP GHKAI +KWV K KK   GEV 
Sbjct: 334 EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVE 393

Query: 205 ----------------------FAPVTRLETVRLLLALAAKNDWEVHHLDVKSAFLNGVL 318
                                 FAPV RLETVRL+++LAA+N W++H +DVKSAFLNG L
Sbjct: 394 RYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 453

Query: 319 LEEVYVRQPKGFVKKGDEDKVYRLLKALYGLRQAPRAWYSRLNQYLLQLGFIKC 480
            EEVY+ QP+G++ KG+EDKV RL K LYGL+QAPRAW +R+++Y  +  FIKC
Sbjct: 454 EEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKC 507


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/174 (53%), Positives = 121/174 (69%), Gaps = 23/174 (13%)
 Frame = +1

Query: 28   EPVCFEQAIADGVWKEAMEKEISAIEKNKTWELTTLPKGHKAIDLKWVLKVKKYQNGEV- 204
            EP+ F++AI    W+ AM++EI +I+KN TWELT+LP GHKAI +KWV K KK   GEV 
Sbjct: 837  EPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVE 896

Query: 205  ----------------------FAPVTRLETVRLLLALAAKNDWEVHHLDVKSAFLNGVL 318
                                  FAPV RLETVRL+++LAA+N W++H +DVKSAFLNG L
Sbjct: 897  RYKARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956

Query: 319  LEEVYVRQPKGFVKKGDEDKVYRLLKALYGLRQAPRAWYSRLNQYLLQLGFIKC 480
             EEVY+ QP+G++ KG+EDKV RL K LYGL+QAPRAW +R+++Y  +  FIKC
Sbjct: 957  EEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKC 1010


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/174 (53%), Positives = 121/174 (69%), Gaps = 23/174 (13%)
 Frame = +1

Query: 28   EPVCFEQAIADGVWKEAMEKEISAIEKNKTWELTTLPKGHKAIDLKWVLKVKKYQNGEV- 204
            EP+ F++AI    W+ AM++EI +I+KN TWELT+LP GHKAI +KWV K KK   GEV 
Sbjct: 837  EPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVE 896

Query: 205  ----------------------FAPVTRLETVRLLLALAAKNDWEVHHLDVKSAFLNGVL 318
                                  FAPV RLETVRL+++LAA+N W++H +DVKSAFLNG L
Sbjct: 897  RYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDL 956

Query: 319  LEEVYVRQPKGFVKKGDEDKVYRLLKALYGLRQAPRAWYSRLNQYLLQLGFIKC 480
             EEVY+ QP+G++ KG+EDKV RL K LYGL+QAPRAW +R+++Y  +  FIKC
Sbjct: 957  EEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKC 1010


Top