BLASTX nr result

ID: Angelica22_contig00038626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038626
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    83   3e-14
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              82   5e-14
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          81   1e-13
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    81   1e-13
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...    80   1e-13

>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
 Frame = +1

Query: 1   ALQKMQFPAKFRNWVYACITTVHYSVKINGSLQGYFKGGKGLR*GDLMSPYHFTISMNIL 180
           AL  M FP +F +W+  CITT  +SV++NG L GYF+  +G+R G  +SPY F ISM +L
Sbjct: 20  ALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALSPYLFVISMEVL 79

Query: 181 SCLLKDKFAAYKH---HWRCKDLDLSHL 255
           S +L D+ A  K    H +CK+L L+HL
Sbjct: 80  SKML-DQAAGGKRFGFHPKCKNLGLTHL 106


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
 Frame = +1

Query: 4   LQKMQFPAKFRNWVYACITTVHYSVKINGSLQGYFKGGKGLR*GDLMSPYHFTISMNILS 183
           L  M FP +F +W+  CI+T  +SV++NG L G+F+  +GLR G  +SPY F +SM++LS
Sbjct: 143 LLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLS 202

Query: 184 CLLKDKFAAYK--HHWRCKDLDLSHL 255
            LL    +A K  +H RCK+L L+HL
Sbjct: 203 KLLDQAASAKKFGYHSRCKELSLTHL 228


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
 Frame = +1

Query: 4   LQKMQFPAKFRNWVYACITTVHYSVKINGSLQGYFKGGKGLR*GDLMSPYHFTISMNILS 183
           L  M  P++F +W+  C+TT  +SV++NG L GYF+   GLR G  +SPY F ISM++L+
Sbjct: 66  LLAMDIPSEFVHWIMLCVTTASFSVQVNGELAGYFQSKCGLRQGCSLSPYLFVISMDVLA 125

Query: 184 CLLKDKFAA---YKHHWRCKDLDLSHL 255
            +L DK A    Y +H RCKD+ L+HL
Sbjct: 126 KML-DKAAGAKKYGYHPRCKDMGLTHL 151


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/87 (45%), Positives = 58/87 (66%), Gaps = 3/87 (3%)
 Frame = +1

Query: 4   LQKMQFPAKFRNWVYACITTVHYSVKINGSLQGYFKGGKGLR*GDLMSPYHFTISMNILS 183
           L  M FP +F +W+  C++T  +S+++NG L GYF+  +GLR G  +SPY F ISM++LS
Sbjct: 337 LAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLS 396

Query: 184 CLLKDKFAA---YKHHWRCKDLDLSHL 255
            +L DK A    + +H RCK L L+HL
Sbjct: 397 RML-DKAAGAREFGYHPRCKTLGLTHL 422


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = +1

Query: 1   ALQKMQFPAKFRNWVYACITTVHYSVKINGSLQGYFKGGKGLR*GDLMSPYHFTISMNIL 180
           A + +  P KF  W+  CI+T ++SV +NGS  G+FK  KGLR GD +SPY F ++M + 
Sbjct: 610 AFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVF 669

Query: 181 SCLLKDKF-AAYKH-HWRCKDLDLSHL 255
           S LLK +F A Y H H +  DL +SHL
Sbjct: 670 SSLLKARFDAGYIHYHPKTADLSISHL 696


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