BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038580
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520335.1| DNA binding protein, putative [Ricinus commu...   111   7e-23
ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis thal...   107   1e-21
ref|XP_002893181.1| ATSWI3C [Arabidopsis lyrata subsp. lyrata] g...   106   2e-21
ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF comp...   105   3e-21
ref|XP_002306648.1| chromatin remodeling complex subunit [Populu...   103   2e-20

>ref|XP_002520335.1| DNA binding protein, putative [Ricinus communis]
           gi|223540554|gb|EEF42121.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 771

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/116 (56%), Positives = 78/116 (67%), Gaps = 22/116 (18%)
 Frame = -1

Query: 287 GPRVAAAYAHTTLIELTKDDQVATSDYN---------VTDSSQQKDS------------- 174
           GPRVAAA AH +L  L++D ++ +   +         V +S QQK+              
Sbjct: 510 GPRVAAACAHASLAALSEDHRMNSERLHGREGSFQGEVANSVQQKEDKPNSSWAQNEAEG 569

Query: 173 TPLSDAKVRAASKAGLSTAATKAKLFADHEEREIQRLSANIINHQLKRLEMKLKQF 6
            PLS  KV+AA+KAGLS AATKAKLFADHEEREIQRLSANIINHQLKRLE+KLKQF
Sbjct: 570 APLSTEKVKAAAKAGLSAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQF 625


>ref|NP_173589.1| SWI/SNF complex subunit SWI3C [Arabidopsis thaliana]
           gi|75315301|sp|Q9XI07.1|SWI3C_ARATH RecName:
           Full=SWI/SNF complex subunit SWI3C; Short=AtSWI3C;
           AltName: Full=Transcription regulatory protein SWI3C
           gi|5263321|gb|AAD41423.1|AC007727_12 Contains similarity
           to gb|AF033823 moira protein from Drosophila
           melanogaster and contains a PF|00249 Myb-like
           DNA-binding domain. EST gb|Z25609 comes from this gene
           [Arabidopsis thaliana] gi|20259454|gb|AAM13847.1|
           putative transcriptional regulatory protein [Arabidopsis
           thaliana] gi|21436147|gb|AAM51320.1| putative
           transcriptional regulatory protein [Arabidopsis
           thaliana] gi|332192023|gb|AEE30144.1| SWI/SNF complex
           subunit SWI3C [Arabidopsis thaliana]
          Length = 807

 Score =  107 bits (266), Expect = 1e-21
 Identities = 62/113 (54%), Positives = 76/113 (67%), Gaps = 19/113 (16%)
 Frame = -1

Query: 287 GPRVAAAYAHTTLIELTKDDQVATSDYNVTDSS------QQKDS-------------TPL 165
           GPRVAA+ AH +L  L++DD++ +      ++S      QQ+D              TPL
Sbjct: 515 GPRVAASCAHESLSVLSEDDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPL 574

Query: 164 SDAKVRAASKAGLSTAATKAKLFADHEEREIQRLSANIINHQLKRLEMKLKQF 6
              KV AA +AGLS AATKAKLFADHEEREIQRLSANI+NHQLKR+E+KLKQF
Sbjct: 575 PQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQF 627


>ref|XP_002893181.1| ATSWI3C [Arabidopsis lyrata subsp. lyrata]
           gi|297339023|gb|EFH69440.1| ATSWI3C [Arabidopsis lyrata
           subsp. lyrata]
          Length = 798

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/113 (54%), Positives = 75/113 (66%), Gaps = 19/113 (16%)
 Frame = -1

Query: 287 GPRVAAAYAHTTLIELTKDDQVATSDYNVTDSS------QQKDS-------------TPL 165
           GPRVAA+ AH +L  L++DD++ +      + S      QQ+D              TPL
Sbjct: 509 GPRVAASCAHESLAVLSEDDRMKSEGVQGKEVSLLDGENQQQDGAHKTSSQNGAEPPTPL 568

Query: 164 SDAKVRAASKAGLSTAATKAKLFADHEEREIQRLSANIINHQLKRLEMKLKQF 6
              KV AA +AGLS AATKAKLFADHEEREIQRLSANI+NHQLKR+E+KLKQF
Sbjct: 569 PQDKVMAAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQF 621


>ref|XP_004161161.1| PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3C-like
           [Cucumis sativus]
          Length = 779

 Score =  105 bits (263), Expect = 3e-21
 Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 16/110 (14%)
 Frame = -1

Query: 287 GPRVAAAYAHTTLIELTKDDQVAT--------SDYN-VTDSSQQKD-------STPLSDA 156
           GPRVAA+ AH +L  L++D   ++        S Y  + +S+ +KD       +T LS  
Sbjct: 517 GPRVAASCAHASLAALSEDSVASSGSIFHMEGSSYGELPNSTDRKDENKAETEATLLSSE 576

Query: 155 KVRAASKAGLSTAATKAKLFADHEEREIQRLSANIINHQLKRLEMKLKQF 6
           +V+ A+KAGL+ AATKAKLFADHEEREIQRLSANIINHQLKRLE+KLKQF
Sbjct: 577 RVKVAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQF 626


>ref|XP_002306648.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222856097|gb|EEE93644.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 796

 Score =  103 bits (256), Expect = 2e-20
 Identities = 62/116 (53%), Positives = 77/116 (66%), Gaps = 22/116 (18%)
 Frame = -1

Query: 287 GPRVAAAYAHTTLIELTKDDQVATSDYN---------VTDSSQQKDST------------ 171
           GPRVAAA AH +L  L+ D+++ +   +         V +S Q ++ +            
Sbjct: 527 GPRVAAACAHASLEALSADNRLGSERLHGREGGFHGEVANSIQLEEDSQHGSRGQNGAEV 586

Query: 170 -PLSDAKVRAASKAGLSTAATKAKLFADHEEREIQRLSANIINHQLKRLEMKLKQF 6
            P S  KV+AA+KAGL+ AATKAKLFADHEEREIQRLSANIINHQLKRLE+KLKQF
Sbjct: 587 APPSAEKVKAAAKAGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQF 642