BLASTX nr result

ID: Angelica22_contig00038567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038567
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEK71643.1| hypothetical chloroplast RF1 [Meliosma aff. cunei...    58   7e-07
gb|ADD30908.1| putative RF1 protein [Meliosma aff. cuneifolia Mo...    58   7e-07
gb|AFB70709.1| Ycf1 protein, partial (chloroplast) [Mollugo vert...    56   3e-06
gb|AEK78239.1| hypothetical chloroplast RF1 [Mollugo verticillata]     56   3e-06
ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|43...    55   5e-06

>gb|AEK71643.1| hypothetical chloroplast RF1 [Meliosma aff. cuneifolia M. J. Moore
           333]
          Length = 420

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 13  EMTNSVVVIGLYYGFLTTFFIGPSYLFLLR 102
           ++ NSVVV+GLYYGFLTTFFIGPSYLFLLR
Sbjct: 17  KIINSVVVVGLYYGFLTTFFIGPSYLFLLR 46


>gb|ADD30908.1| putative RF1 protein [Meliosma aff. cuneifolia Moore 333]
          Length = 1894

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 13  EMTNSVVVIGLYYGFLTTFFIGPSYLFLLR 102
           ++ NSVVV+GLYYGFLTTFFIGPSYLFLLR
Sbjct: 17  KIINSVVVVGLYYGFLTTFFIGPSYLFLLR 46


>gb|AFB70709.1| Ycf1 protein, partial (chloroplast) [Mollugo verticillata]
          Length = 470

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 13  EMTNSVVVIGLYYGFLTTFFIGPSYLFLLRQE 108
           ++ NSVVV+GLYYGFLTTF IGPSYLFLLR +
Sbjct: 17  KIVNSVVVVGLYYGFLTTFSIGPSYLFLLRAQ 48


>gb|AEK78239.1| hypothetical chloroplast RF1 [Mollugo verticillata]
          Length = 212

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 13  EMTNSVVVIGLYYGFLTTFFIGPSYLFLLRQE 108
           ++ NSVVV+GLYYGFLTTF IGPSYLFLLR +
Sbjct: 17  KIVNSVVVVGLYYGFLTTFSIGPSYLFLLRAQ 48


>ref|YP_007317307.1| Ycf1 (chloroplast) [Camellia sinensis] gi|430728331|gb|AGA55655.1|
           Ycf1 (chloroplast) [Camellia sinensis]
          Length = 1873

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = +1

Query: 13  EMTNSVVVIGLYYGFLTTFFIGPSYLFLLRQE 108
           ++ NSVVV+GLYYGFLTTF IGPSYLFLLR +
Sbjct: 17  KIINSVVVVGLYYGFLTTFSIGPSYLFLLRAQ 48


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