BLASTX nr result

ID: Angelica22_contig00038540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038540
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat...    56   3e-06
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...    56   3e-06
emb|CBI15973.3| unnamed protein product [Vitis vinifera]               55   8e-06
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]    55   8e-06

>ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 38/60 (63%)
 Frame = +3

Query: 126 HAQLIKLGLNTNPIFATRLITDYSRSPISNSLSHAHQLFDEIPNKDTVLWTTLISAYTHS 305
           H + IKLG   +P  A  LIT Y++    NS   AHQ+FDE+P++DTV W  +ISA+  S
Sbjct: 16  HCRAIKLGSIADPYTANNLITSYAKCTELNS---AHQVFDEMPHRDTVSWNAIISAFASS 72


>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = +3

Query: 126 HAQLIKLGLNTNPIFATRLITDYSRSPISNSLSHAHQLFDEIPNKDTVLWTTLISAYTHS 305
           HA ++K+G  +NP  A+ L+  Y +     S   A +LFDEIP ++ V+W  +IS YTHS
Sbjct: 86  HAHIVKMGFLSNPFVASALVDMYGKCACIFS---ARKLFDEIPQRNVVVWNAMISLYTHS 142

Query: 306 N 308
           N
Sbjct: 143 N 143


>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +3

Query: 126 HAQLIKLGLNTNPIFATRLITDYSRSPISNSLSHAHQLFDEIPNKDTVLWTTLISAYTHS 305
           HAQ+++ GL  +P  A+RLIT  + SP   SL +A Q+FD+IP+ +   W TLI AY  S
Sbjct: 55  HAQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASS 113

Query: 306 N 308
           +
Sbjct: 114 S 114


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +3

Query: 126 HAQLIKLGLNTNPIFATRLITDYSRSPISNSLSHAHQLFDEIPNKDTVLWTTLISAYTHS 305
           HAQ+++ GL  +P  A+RLIT  + SP   SL +A Q+FD+IP+ +   W TLI AY  S
Sbjct: 55  HAQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASS 113

Query: 306 N 308
           +
Sbjct: 114 S 114


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/61 (45%), Positives = 40/61 (65%)
 Frame = +3

Query: 126 HAQLIKLGLNTNPIFATRLITDYSRSPISNSLSHAHQLFDEIPNKDTVLWTTLISAYTHS 305
           HAQ+++ GL  +P  A+RLIT  + SP   SL +A Q+FD+IP+ +   W TLI AY  S
Sbjct: 55  HAQMLRTGLFFDPFSASRLITAAALSPFP-SLDYAQQVFDQIPHPNLYTWNTLIRAYASS 113

Query: 306 N 308
           +
Sbjct: 114 S 114


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