BLASTX nr result

ID: Angelica22_contig00038523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038523
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptas...    72   1e-20
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]    64   2e-20
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    66   5e-19
gb|ABN08570.1| WW/Rsp5/WWP [Medicago truncatula]                       59   3e-18
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    60   3e-17

>gb|ABN08038.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 573

 Score = 71.6 bits (174), Expect(2) = 1e-20
 Identities = 31/64 (48%), Positives = 44/64 (68%)
 Frame = +2

Query: 2   EVLLKTMVQSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHK 181
           EVL+K++ Q++P+Y M  FL+P  LC ELERMM  F+W S+ +  +GI    W  +T+HK
Sbjct: 321 EVLIKSVAQAIPSYCMGAFLIPASLCEELERMMNSFYWGSKKNGRRGINWMRWDFLTLHK 380

Query: 182 SEGG 193
           S GG
Sbjct: 381 SLGG 384



 Score = 53.1 bits (126), Expect(2) = 1e-20
 Identities = 21/45 (46%), Positives = 33/45 (73%)
 Frame = +1

Query: 190 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFL 324
           G+ FR++  FN++MLGK GW+LL+    L +++ K +Y+PR DFL
Sbjct: 384 GLGFRNLEAFNLSMLGKQGWKLLSDSSSLFTRILKAKYFPRRDFL 428


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score = 63.9 bits (154), Expect(2) = 2e-20
 Identities = 26/64 (40%), Positives = 42/64 (65%)
 Frame = +2

Query: 2   EVLLKTMVQSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHK 181
           ++L+K + Q++P+Y M+ FLLP+ L  EL++MM  FWW  +S   + I   SW ++ + K
Sbjct: 191 KILIKVVGQAIPSYCMSTFLLPISLSEELQKMMNSFWWGPKSDGGRRINWLSWDKLCLRK 250

Query: 182 SEGG 193
            EGG
Sbjct: 251 EEGG 254



 Score = 59.7 bits (143), Expect(2) = 2e-20
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = +1

Query: 190 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFL 324
           G+ FR++ +FN+AMLGK GW L+T+PD L++++ K RYY   DFL
Sbjct: 254 GLGFRNLRDFNLAMLGKQGWNLITKPDSLIARLLKARYYCSRDFL 298


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 66.2 bits (160), Expect(2) = 5e-19
 Identities = 27/64 (42%), Positives = 45/64 (70%)
 Frame = +2

Query: 2   EVLLKTMVQSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHK 181
           EVL+K++ Q++P+Y M+VFLLP  + +++E+M+  FWW  ++    GI   SW+R+T+ K
Sbjct: 382 EVLIKSVAQAIPSYCMSVFLLPHSIADDIEKMLNSFWWGMKNEGRGGIRWMSWERLTMRK 441

Query: 182 SEGG 193
             GG
Sbjct: 442 EWGG 445



 Score = 52.8 bits (125), Expect(2) = 5e-19
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = +1

Query: 190 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFL 324
           GM FR +H F++AM GK  W  LT PD +VS++FK +Y+   +FL
Sbjct: 445 GMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNENFL 489


>gb|ABN08570.1| WW/Rsp5/WWP [Medicago truncatula]
          Length = 265

 Score = 58.5 bits (140), Expect(2) = 3e-18
 Identities = 23/54 (42%), Positives = 39/54 (72%)
 Frame = +2

Query: 2   EVLLKTMVQSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWK 163
           E+L+K+++QS+P+Y M+ F+LP  L NE+E+M+  FWW   +  ++G+  KS K
Sbjct: 52  EILIKSVLQSIPSYLMSTFMLPNSLINEIEKMLNAFWWGHGNGSNRGMCFKSLK 105



 Score = 57.8 bits (138), Expect(2) = 3e-18
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = +1

Query: 187 RGMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDF 321
           RGM F+S+  FN+AMLGK  W++LT P  +++++FK RY+P  D+
Sbjct: 97  RGMCFKSLKAFNMAMLGKQAWKILTHPKSMITRLFKARYFPTSDY 141


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 60.1 bits (144), Expect(2) = 3e-17
 Identities = 29/64 (45%), Positives = 40/64 (62%)
 Frame = +2

Query: 2   EVLLKTMVQSVPTYAMNVFLLPVGLCNELERMMARFWWTSRSSQDKGIISKSWKRMTVHK 181
           E+ LKT+ QS+PTY M + LLP  LC ++E MM  F+W S + Q + I   SW +M   K
Sbjct: 258 EICLKTVAQSIPTYVMQLLLLPKDLCRDIESMMNGFFWDS-NPQCRSIRWMSWGKMCKQK 316

Query: 182 SEGG 193
            +GG
Sbjct: 317 KDGG 320



 Score = 53.1 bits (126), Expect(2) = 3e-17
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = +1

Query: 190 GMSFRSMHEFNVAMLGK*GWRLLTRPDLLVSKVFKGRYYPRGDFL 324
           G+ FR + +FN+A+L K GWR L  PD LV+++F+ RY+    FL
Sbjct: 320 GLGFRKLXDFNLALLAKQGWRFLRNPDSLVTRIFQARYFRNSSFL 364


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