BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038480
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331971.1| glutamate-gated kainate-type ion channel rec...    59   5e-07
ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]...    55   4e-06
ref|XP_002316840.1| glutamate-gated kainate-type ion channel rec...    55   8e-06
emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]    55   8e-06

>ref|XP_002331971.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222874748|gb|EEF11879.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 407

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/81 (48%), Positives = 43/81 (53%)
 Frame = +3

Query: 36  CLLFLLVTIFFLSILSYGSTIXXXXXXXDDKISTTRIGVVIDEASRVGKEHKIAMKIAVQ 215
           C L L V I FL ILSYG                T IG +ID  SR GKE K AM+IAVQ
Sbjct: 29  CFL-LSVLITFLLILSYGVEAAA------STTKVTNIGAIIDGNSRTGKEEKTAMEIAVQ 81

Query: 216 LKFNNSSNHKLIIHFRNITAD 278
              N S NHKL +HF+N   D
Sbjct: 82  NFNNISRNHKLSLHFKNPKGD 102


>ref|XP_003593704.1| Glutamate receptor 2.7 [Medicago truncatula]
           gi|355482752|gb|AES63955.1| Glutamate receptor 2.7
           [Medicago truncatula]
          Length = 1083

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 34/90 (37%), Positives = 49/90 (54%)
 Frame = +3

Query: 9   YLSKASRTFCLLFLLVTIFFLSILSYGSTIXXXXXXXDDKISTTRIGVVIDEASRVGKEH 188
           YLS   +    ++L   +     L YG  I       D+K+ +  IGV+ID  SR+GKE 
Sbjct: 3   YLSTFPQALARIWLFFVLLVPFALIYG--IRDETMNSDNKVIS--IGVIIDGDSRIGKEQ 58

Query: 189 KIAMKIAVQLKFNNSSNHKLIIHFRNITAD 278
           ++AM IA Q   N S N+KL ++F+N T D
Sbjct: 59  EVAMDIAAQSYNNTSKNYKLALYFKNSTKD 88


>ref|XP_002316840.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222859905|gb|EEE97452.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 838

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 38/89 (42%), Positives = 48/89 (53%)
 Frame = +3

Query: 12  LSKASRTFCLLFLLVTIFFLSILSYGSTIXXXXXXXDDKISTTRIGVVIDEASRVGKEHK 191
           ++K  + F LL +L+T  FL ILS G                T IG +ID  SR GKE K
Sbjct: 22  VNKVLKPFFLLSVLIT--FLLILSDGVEAAAGTN------KVTNIGAIIDGNSRSGKEEK 73

Query: 192 IAMKIAVQLKFNNSSNHKLIIHFRNITAD 278
            AM+IAVQ   N S NHKL +HF++   D
Sbjct: 74  TAMEIAVQNFNNISRNHKLSLHFKHPKGD 102


>emb|CAN82769.1| hypothetical protein VITISV_037882 [Vitis vinifera]
          Length = 2220

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +3

Query: 132 STTRIGVVIDEASRVGKEHKIAMKIAVQLKFNNSSNHKLIIHFRNITAD 278
           ++T IG +ID  SR GKE K AMKIAV    NNS+NHKL + FRN T +
Sbjct: 28  NSTVIGAIIDANSRKGKEEKTAMKIAVDKFNNNSNNHKLSLIFRNFTGE 76