BLASTX nr result

ID: Angelica22_contig00038399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038399
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594254.1| RNA-binding protein, putative [Medicago trun...    80   2e-13
ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C,...    78   8e-13
ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002301585.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]      73   3e-11

>ref|XP_003594254.1| RNA-binding protein, putative [Medicago truncatula]
           gi|355483302|gb|AES64505.1| RNA-binding protein,
           putative [Medicago truncatula]
          Length = 522

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -2

Query: 124 RMEMEPGKLFIGGISWDTNEDRLKEYFQTFGEVVEAVIMKD 2
           R+EM+PGKLFIGGISWDTNEDRL++YFQ FG+VVEAVIMKD
Sbjct: 39  RVEMDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKD 79


>ref|XP_002528240.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223532357|gb|EEF34155.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 456

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = -2

Query: 121 MEMEPGKLFIGGISWDTNEDRLKEYFQTFGEVVEAVIMKD 2
           MEME GKLFIGGISWDTNEDRL+EYFQ FGEV+EAVIMKD
Sbjct: 1   MEMELGKLFIGGISWDTNEDRLREYFQVFGEVMEAVIMKD 40


>ref|XP_002308799.1| predicted protein [Populus trichocarpa] gi|222854775|gb|EEE92322.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/40 (90%), Positives = 38/40 (95%)
 Frame = -2

Query: 121 MEMEPGKLFIGGISWDTNEDRLKEYFQTFGEVVEAVIMKD 2
           MEME GKLFIGGISWDTNEDRLKEYF+ FGEV+EAVIMKD
Sbjct: 1   MEMELGKLFIGGISWDTNEDRLKEYFRAFGEVLEAVIMKD 40


>ref|XP_002301585.1| predicted protein [Populus trichocarpa] gi|222843311|gb|EEE80858.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/40 (82%), Positives = 38/40 (95%)
 Frame = -2

Query: 121 MEMEPGKLFIGGISWDTNEDRLKEYFQTFGEVVEAVIMKD 2
           M+ + GKLFIGGISWDTNE+RLK+YFQ+FGEVVEAVIMKD
Sbjct: 1   MQSDSGKLFIGGISWDTNEERLKDYFQSFGEVVEAVIMKD 40


>gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
          Length = 445

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/40 (80%), Positives = 38/40 (95%)
 Frame = -2

Query: 121 MEMEPGKLFIGGISWDTNEDRLKEYFQTFGEVVEAVIMKD 2
           M+ME GKLFIGGISW+T EDRL++YFQ+FGEV+EAVIMKD
Sbjct: 1   MDMESGKLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKD 40


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