BLASTX nr result

ID: Angelica22_contig00038343 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038343
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vin...   104   8e-21
emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]   104   8e-21
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...    96   2e-18
ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]    96   4e-18
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]    94   9e-18

>ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
          Length = 1065

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/109 (52%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
 Frame = -3

Query: 307 PPPLLSKEDWRFAQKLQGGSSTVGGIGDRRKVNRNDSGVAGGGVSLFSNPPGFNNKK--- 137
           PPPLLSKEDWRFAQ+L+GGSS +GGIGDRRK+NRNDSG  G   S++S PPGFN++K   
Sbjct: 113 PPPLLSKEDWRFAQRLKGGSSGLGGIGDRRKMNRNDSGSVGR--SMYSMPPGFNSRKEET 170

Query: 136 ----QXXXXXXXXXXXXXXXXXXXXXXXEQKSLTEIFQDDVGHATPGSG 2
               +                       +QKSL EIFQDD+G  TP SG
Sbjct: 171 EADSEKLCGSAEWGGDGLIGLSGLGLGSKQKSLAEIFQDDLGRTTPVSG 219


>emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
          Length = 1039

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/109 (52%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
 Frame = -3

Query: 307 PPPLLSKEDWRFAQKLQGGSSTVGGIGDRRKVNRNDSGVAGGGVSLFSNPPGFNNKK--- 137
           PPPLLSKEDWRFAQ+L+GGSS +GGIGDRRK+NRNDSG  G   S++S PPGFN++K   
Sbjct: 87  PPPLLSKEDWRFAQRLKGGSSGLGGIGDRRKMNRNDSGSVGR--SMYSMPPGFNSRKEET 144

Query: 136 ----QXXXXXXXXXXXXXXXXXXXXXXXEQKSLTEIFQDDVGHATPGSG 2
               +                       +QKSL EIFQDD+G  TP SG
Sbjct: 145 EADSEKLCGSAEWGGEGLIGLSGLGLGSKQKSLAEIFQDDLGRTTPVSG 193


>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
           gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP
           [Medicago truncatula] gi|355486444|gb|AES67647.1|
           Pumilio-like protein [Medicago truncatula]
          Length = 1047

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/110 (47%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
 Frame = -3

Query: 307 PPPLLSKEDWRFAQKLQGGSSTVGGIGDRRKVNRNDSGVAGGGVSLFSNPPGFNNKK--- 137
           PPPLLSKEDWRF+Q+L+GG+S +GGIGDRRKVN  D     GG ++F+ PPGFNN+K   
Sbjct: 114 PPPLLSKEDWRFSQRLKGGASAIGGIGDRRKVNGADE---NGGRAVFATPPGFNNRKRET 170

Query: 136 -----QXXXXXXXXXXXXXXXXXXXXXXXEQKSLTEIFQDDVGHATPGSG 2
                +                       +QKSL EIFQDD+GH T  +G
Sbjct: 171 EVVADEKIRGSAEWGGDGLIGLPGLGLGTKQKSLAEIFQDDMGHNTSVTG 220


>ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1049

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/104 (50%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
 Frame = -3

Query: 307 PPPLLSKEDWRFAQKLQGGSSTVGGIGDRRKVNRNDSGVAGGGVSLFSNPPGFNNKKQ-- 134
           PPPLLSKEDWRF Q+L+GG+S +GGIGDRRKVNR D     GG  LFS PPGFN +KQ  
Sbjct: 122 PPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDD---NGGRLLFSTPPGFNMRKQES 178

Query: 133 ----XXXXXXXXXXXXXXXXXXXXXXXEQKSLTEIFQDDVGHAT 14
                                      +QKS  EIFQDD+GH T
Sbjct: 179 EVDNEKTKGSAEWGGDGLIGLPGLGLSKQKSFVEIFQDDLGHNT 222


>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1033

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/104 (50%), Positives = 60/104 (57%), Gaps = 6/104 (5%)
 Frame = -3

Query: 307 PPPLLSKEDWRFAQKLQGGSSTVGGIGDRRKVNRNDSGVAGGGVSLFSNPPGFNNKKQ-- 134
           PPPLLSKEDWRF Q+L+GG+S +GGIGDRRKVNR D      G SLF+ PPGFN +KQ  
Sbjct: 119 PPPLLSKEDWRFQQRLKGGASALGGIGDRRKVNRTDD---NAGRSLFATPPGFNMRKQES 175

Query: 133 ----XXXXXXXXXXXXXXXXXXXXXXXEQKSLTEIFQDDVGHAT 14
                                      +QKS  EIFQDD+GH T
Sbjct: 176 EVDNEKTRGSAEWGGDGLIGLPGLGLSKQKSFAEIFQDDLGHNT 219


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