BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038305
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740175.1| hypothetical protein RF1 [Daucus carota] gi|118...   162   3e-38
ref|YP_004222704.1| hypothetical chloroplast RF19 [Anthriscus ce...   150   8e-35
ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus ...   129   2e-28
ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68...   113   1e-23
gb|ADD30903.1| putative RF1 protein [Aucuba japonica]                 112   2e-23

>ref|YP_740175.1| hypothetical protein RF1 [Daucus carota]
            gi|118574747|sp|Q0G9Q4.1|YCF1_DAUCA RecName:
            Full=Putative membrane protein ycf1
            gi|113200966|gb|ABI32482.1| hypothetical protein RF1
            [Daucus carota]
          Length = 1826

 Score =  162 bits (409), Expect = 3e-38
 Identities = 91/135 (67%), Positives = 99/135 (73%)
 Frame = +2

Query: 2    SKEPKGVVIKNVXXXXXXXXXXXXXXXXXVHSTRLFILRKVYESGETKQKKDSIIRNKII 181
            SKEPK V+IKNV                 +H TRLFIL+KVYESGET +KKD IIRN+ I
Sbjct: 940  SKEPKEVIIKNVLFLFIKRIKKELFK---IHPTRLFILKKVYESGETNKKKDYIIRNQQI 996

Query: 182  HDSFRKIKSTDNTNYSLREKKIKNLADRTSTIRKKTKSLTKEKNSNAKKRSSPNKTSYSY 361
            HDSF KIKSTDN N SLR+KKIKNL DRTSTIR KTK L KEKNSNAKKR SPNKT  S+
Sbjct: 997  HDSFIKIKSTDNKNDSLRDKKIKNLTDRTSTIRTKTKGLMKEKNSNAKKRGSPNKT--SF 1054

Query: 362  NGKEKSPKIFWKILK 406
            N K+KSP I  KILK
Sbjct: 1055 NRKKKSPNILLKILK 1069


>ref|YP_004222704.1| hypothetical chloroplast RF19 [Anthriscus cerefolium]
            gi|289645633|gb|ADD13696.1| hypothetical chloroplast RF19
            [Anthriscus cerefolium]
          Length = 1793

 Score =  150 bits (380), Expect = 8e-35
 Identities = 83/119 (69%), Positives = 91/119 (76%)
 Frame = +2

Query: 2    SKEPKGVVIKNVXXXXXXXXXXXXXXXXXVHSTRLFILRKVYESGETKQKKDSIIRNKII 181
            SKEPK VVIKNV                 VH T+LFILRKV+E GET +KKD IIRN+II
Sbjct: 944  SKEPKEVVIKNVLVLFLKRIKKELLK---VHPTQLFILRKVHEYGETNKKKDYIIRNQII 1000

Query: 182  HDSFRKIKSTDNTNYSLREKKIKNLADRTSTIRKKTKSLTKEKNSNAKKRSSPNKTSYS 358
            +DSF KIKSTDNTNYSLREKKIK L DRTSTIRKKTKSLTKEK SNAKK+ SPNK S++
Sbjct: 1001 NDSFIKIKSTDNTNYSLREKKIKTLTDRTSTIRKKTKSLTKEKKSNAKKKRSPNKKSFT 1059


>ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus senticosus]
            gi|347448265|gb|AEO92677.1| ycf1 protein (chloroplast)
            [Eleutherococcus senticosus]
          Length = 1875

 Score =  129 bits (324), Expect = 2e-28
 Identities = 77/137 (56%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +2

Query: 2    SKEPKGVVIKNVXXXXXXXXXXXXXXXXXVHSTRLFILRKVYESGETKQKKDSIIRNKII 181
            SKE K   IKNV                 V++T LF L++VYESGET Q+K SII N+ I
Sbjct: 969  SKETKRGFIKNVLFLFLKRIKKELSK---VNTTLLFRLKEVYESGETNQEKGSIISNQTI 1025

Query: 182  HDSFRKIKSTDNTNYSLREKKIKNLADRTSTIRKKTKSLTKEKNSNAKK-RSSPNKTSYS 358
            HDSF KI+STD TNYSLREKKIKNL DRTSTI+KK KS+TKEK        SSPNKTSY+
Sbjct: 1026 HDSFNKIRSTDWTNYSLREKKIKNLTDRTSTIKKKIKSITKEKKKGTPGINSSPNKTSYN 1085

Query: 359  YNGKEKSPKIFWKILKK 409
                 +SPK  W+IL++
Sbjct: 1086 V----ESPKDIWQILER 1098


>ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68RU8.1|YCF1_PANGI
            RecName: Full=Putative membrane protein ycf1
            gi|51235372|gb|AAT98568.1| ycf1 protein [Panax ginseng]
          Length = 1919

 Score =  113 bits (283), Expect = 1e-23
 Identities = 64/103 (62%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = +2

Query: 104  LFILRKVYESGETKQKKDSIIRNKIIHDSFRKIKSTDNTNYSLREKKIKNLADRTSTIRK 283
            LF L++VYESGET Q+K SII N+ IH+SF KI+STD  NYS REKKIKNL DRTS IRK
Sbjct: 1048 LFRLKEVYESGETNQEKGSIISNQTIHNSFNKIRSTD--NYSPREKKIKNLTDRTSPIRK 1105

Query: 284  KTKSLTKEKNSNAKK-RSSPNKTSYSYNGKEKSPKIFWKILKK 409
            K KS+TKEK       +SSPNK SY+     +SPK  W+ILK+
Sbjct: 1106 KIKSITKEKKKGTPGIKSSPNKRSYNV----ESPKDIWQILKR 1144


>gb|ADD30903.1| putative RF1 protein [Aucuba japonica]
          Length = 1890

 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/108 (57%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = +2

Query: 89   VHSTRLFILRKVYESGETKQKKDSIIRNKIIHDSFRKIKSTDNTNYSLREKKIKNLADRT 268
            V+   LF LRKVYES ETK++KDSII N+IIH+SF +I S D TNYSL EKK+K+LADRT
Sbjct: 1010 VNPILLFRLRKVYESSETKKEKDSIISNQIIHESFSQIGSPDWTNYSLTEKKMKDLADRT 1069

Query: 269  STIRKKTKSLTKEKNS-NAKKRSSPNKTSYSYNGKEKSPKIFWKILKK 409
             TIR + + +TKEK     K + SPNKTSY+ + + +SPK  W+I K+
Sbjct: 1070 RTIRNQIERITKEKKKVTPKIKMSPNKTSYN-DKRLESPKNIWQIFKR 1116