BLASTX nr result

ID: Angelica22_contig00038052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00038052
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268559.2| PREDICTED: medium-chain-fatty-acid--CoA liga...   109   3e-22
ref|XP_002307223.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002893118.1| adenosine monophosphate binding protein 1 AM...    99   5e-19
ref|XP_002337088.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain...    97   2e-18

>ref|XP_002268559.2| PREDICTED: medium-chain-fatty-acid--CoA ligase-like, partial [Vitis
           vinifera]
          Length = 482

 Score =  109 bits (272), Expect = 3e-22
 Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
 Frame = +3

Query: 3   TMLASILNQLEAKVIFVDSEFVQVVHAAFRTLSLARSKLPIVILIPESDQEV---SHIET 173
           TMLA IL QLEAK+IFVD +F+QV   A   LS A+ K PI++LI E        S IE 
Sbjct: 35  TMLALILQQLEAKIIFVDYQFLQVFLQALDILSEAKIKPPILVLILECCHPATFSSTIEK 94

Query: 174 LPDDSLTYSSLLVTGRNDFQVVRPKDEIDPISVNYTSGSTGKPKGVIYS 320
           +P  +L Y  LL  G+ DF+++RP +E  PISVNYTSGSTG PKGV+YS
Sbjct: 95  IPAGNLDYDGLLAMGQPDFEIIRPSNECTPISVNYTSGSTGNPKGVVYS 143


>ref|XP_002307223.1| predicted protein [Populus trichocarpa] gi|222856672|gb|EEE94219.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  103 bits (257), Expect = 1e-20
 Identities = 55/104 (52%), Positives = 69/104 (66%)
 Frame = +3

Query: 9   LASILNQLEAKVIFVDSEFVQVVHAAFRTLSLARSKLPIVILIPESDQEVSHIETLPDDS 188
           LA  L QLEAK+IFVD +F  VV  A   LS  +   P +++IPE D+  S         
Sbjct: 105 LALALEQLEAKLIFVDYQFTDVVLKALDLLSQKKVNPPHLVVIPECDKSSSMDRKHIASD 164

Query: 189 LTYSSLLVTGRNDFQVVRPKDEIDPISVNYTSGSTGKPKGVIYS 320
           L Y+ LL  GR+DF+++RP +E DPISVNYTSGSTGKPKGV+YS
Sbjct: 165 LDYNCLLEMGRDDFRIIRPNNECDPISVNYTSGSTGKPKGVVYS 208


>ref|XP_002893118.1| adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
           lyrata subsp. lyrata] gi|297338960|gb|EFH69377.1|
           adenosine monophosphate binding protein 1 AMPBP1
           [Arabidopsis lyrata subsp. lyrata]
          Length = 555

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 48/106 (45%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +3

Query: 6   MLASILNQLEAKVIFVDSEFVQVVHAAFRTLSLARSKLPIVILIPES-DQEVSHIETLPD 182
           ++A +L     KVIF D +F+Q+   A   LS    K+PI++L+PE   Q VS  +   +
Sbjct: 102 LVAVLLRHSGTKVIFADHQFLQIAQGACEILSKKGDKVPILVLVPEPLTQSVSGKKRSEE 161

Query: 183 DSLTYSSLLVTGRNDFQVVRPKDEIDPISVNYTSGSTGKPKGVIYS 320
           D + Y  ++  G++DF+V+RP DE DPISVNYTSG+T  PKGV+YS
Sbjct: 162 DIMEYEDVVAMGKSDFEVIRPTDECDPISVNYTSGTTSSPKGVVYS 207


>ref|XP_002337088.1| predicted protein [Populus trichocarpa] gi|222837992|gb|EEE76357.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 56/105 (53%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = +3

Query: 9   LASILNQLEAKVIFVDSEFVQVVHAAFRTLSLARSKLPIVILIPESDQEVSHIETLPDD- 185
           LA  L QL AK+IFVD +F  V   A   LSL   K P ++ IPE D+  S ++      
Sbjct: 64  LALTLEQLNAKLIFVDYQFNDVALKALDLLSLKSVKPPHLVGIPECDKSTSSMDCKNISC 123

Query: 186 SLTYSSLLVTGRNDFQVVRPKDEIDPISVNYTSGSTGKPKGVIYS 320
            L Y+ LL  GR+DF ++RP  E DPISVNYTSGSTGKPKGVIYS
Sbjct: 124 DLDYNGLLEMGRDDFTIIRPNKECDPISVNYTSGSTGKPKGVIYS 168


>ref|XP_003631909.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
           ligase-like [Vitis vinifera]
          Length = 419

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/106 (46%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = +3

Query: 6   MLASILNQLEAKVIFVDSEFVQVVHAAFRTLSLARSKLPIVILIPESD-QEVSHIETLPD 182
           M++++L   EAK+IFVD + +++ H A   L    +K PI++LI ESD    ++  T   
Sbjct: 146 MVSTLLRHSEAKIIFVDYQLLEIAHVALDLLKKTETKPPILVLIVESDGSPPTNFST--S 203

Query: 183 DSLTYSSLLVTGRNDFQVVRPKDEIDPISVNYTSGSTGKPKGVIYS 320
           D   Y SLL TG+++F++ RP DE DPISVNYTSG+T  PKGV+Y+
Sbjct: 204 DGYEYESLLATGQSEFEIRRPIDEWDPISVNYTSGTTSSPKGVVYN 249


Top