BLASTX nr result

ID: Angelica22_contig00037849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037849
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_002525463.1| pentatricopeptide repeat-containing protein,...   207   6e-52
ref|XP_004147552.1| PREDICTED: pentatricopeptide repeat-containi...   207   8e-52
emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]   205   3e-51
emb|CBI23162.3| unnamed protein product [Vitis vinifera]              201   6e-50

>ref|XP_002319146.1| predicted protein [Populus trichocarpa] gi|222857522|gb|EEE95069.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  213 bits (543), Expect = 1e-53
 Identities = 108/179 (60%), Positives = 131/179 (73%), Gaps = 1/179 (0%)
 Frame = -2

Query: 534 LLGDAHKLFDEMPHRNCVSWNVMITGFVKWGDVSKARELFDSMPDKNVVSWTGIIDGYTR 355
           +LGDA  LFDEMP RN V+WNVMITG VKWG +  A  LFD MP+KNVVSWTGIIDGY R
Sbjct: 7   VLGDAMILFDEMPKRNVVTWNVMITGLVKWGKLEFASSLFDEMPEKNVVSWTGIIDGYIR 66

Query: 354 MNRADEALYLFRRMVD-EGIKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDI 178
            N+  E L LFRRMV  EGIKP+E+T+L + P++ N   L+ C   H Y EK GF+  DI
Sbjct: 67  NNKYSEGLSLFRRMVVCEGIKPTEITILAILPAISNMGELKSCSLIHGYAEKRGFNAFDI 126

Query: 177 RVSNSLIVVYAKCGNVEGASKVFDCISEDRKNVVSWTSIISCYATYGMVKEAVESFNKM 1
           RV+NS+I  Y+KCG +  A K F+ IS +RKN+VSWTSIIS +A +GM KEAVE F +M
Sbjct: 127 RVANSIIDCYSKCGCIASAFKFFEDISVERKNLVSWTSIISGFAMHGMWKEAVEYFERM 185



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 3/152 (1%)
 Frame = -2

Query: 474 NVMITGFVKWGDVSKARELFD--SMPDKNVVSWTGIIDGYTRMNRADEALYLFRRMVDEG 301
           N +I  + K G ++ A + F+  S+  KN+VSWT II G+       EA+  F RM   G
Sbjct: 130 NSIIDCYSKCGCIASAFKFFEDISVERKNLVSWTSIISGFAMHGMWKEAVEYFERMEKAG 189

Query: 300 IKPSELTMLVVFPSVWNKRCL-ELCRCFHAYTEKSGFSGSDIRVSNSLIVVYAKCGNVEG 124
           +KP+ +T L V  +  +   + E  RCF+    + G    DI+    ++ +  + G +E 
Sbjct: 190 LKPNRVTFLSVLNACSHGGLVDEGLRCFYKMVNEHGVL-PDIKHYGCVVDMLGRTGRLEE 248

Query: 123 ASKVFDCISEDRKNVVSWTSIISCYATYGMVK 28
           A  +   I  +  NVV W +++   + +G V+
Sbjct: 249 AENMALEIPSEIVNVVIWRTLLGACSFHGNVE 280


>ref|XP_002525463.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535276|gb|EEF36953.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 337

 Score =  207 bits (528), Expect = 6e-52
 Identities = 105/178 (58%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
 Frame = -2

Query: 531 LGDAHKLFDEMPHRNCVSWNVMITGFVKWGDVSKARELFDSMPDKNVVSWTGIIDGYTRM 352
           LG+A   FDEMP +N V+WNVMITG VKWG +  AR  FD MP+KNVVSWTGIIDGY RM
Sbjct: 8   LGNALLAFDEMPEKNSVTWNVMITGLVKWGKLEFARSFFDDMPEKNVVSWTGIIDGYVRM 67

Query: 351 NRADEALYLFRRMVD-EGIKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDIR 175
           NR  E L LFRRMV  EGI PSE+T+L + P++     L+ C   H   EK GF+ SDIR
Sbjct: 68  NRITEGLALFRRMVSFEGIAPSEITILAILPAISGIGELQNCGLIHCLVEKRGFNSSDIR 127

Query: 174 VSNSLIVVYAKCGNVEGASKVFDCISEDRKNVVSWTSIISCYATYGMVKEAVESFNKM 1
           V+NS+I  YAKCG +  AS+ F+ IS +RKN+VSWTSIIS +A +GM +EAV+ F  M
Sbjct: 128 VTNSIIDTYAKCGCIVSASRFFEEISVERKNLVSWTSIISGFAMHGMGQEAVKRFENM 185



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 5/151 (3%)
 Frame = -2

Query: 474 NVMITGFVKWGDVSKARELFD--SMPDKNVVSWTGIIDGYTRMNRADEALYLFRRMVDEG 301
           N +I  + K G +  A   F+  S+  KN+VSWT II G+       EA+  F  M   G
Sbjct: 130 NSIIDTYAKCGCIVSASRFFEEISVERKNLVSWTSIISGFAMHGMGQEAVKRFENMERTG 189

Query: 300 IKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGS---DIRVSNSLIVVYAKCGNV 130
           +KP+ +T L V  +  +     L    H + EK     S   DI+    L+ +  + G +
Sbjct: 190 LKPNRVTFLSVLNACSHG---GLVAEGHEFFEKMVNQYSILPDIKHYGCLVDMLGRTGRL 246

Query: 129 EGASKVFDCISEDRKNVVSWTSIISCYATYG 37
           E A K+   I  +  N V W +++   + +G
Sbjct: 247 EEAEKLALGIPSEIVNAVIWRTLLGACSFHG 277


>ref|XP_004147552.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09220,
           mitochondrial-like [Cucumis sativus]
           gi|449484988|ref|XP_004157038.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g09220,
           mitochondrial-like [Cucumis sativus]
          Length = 495

 Score =  207 bits (527), Expect = 8e-52
 Identities = 101/176 (57%), Positives = 135/176 (76%), Gaps = 1/176 (0%)
 Frame = -2

Query: 525 DAHKLFDEMPHRNCVSWNVMITGFVKWGDVSKARELFDSMPDKNVVSWTGIIDGYTRMNR 346
           DA K+FDEMP R+ V+WNV+ITG VK+G++ +AR++FD MP + VVSWT IIDGYTR+NR
Sbjct: 168 DAMKVFDEMPDRSSVTWNVLITGLVKFGELKRARDVFDQMPMRTVVSWTAIIDGYTRLNR 227

Query: 345 ADEALYLFRRMVDE-GIKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDIRVS 169
            +EA  LF RMV   G++P+E+T+L +FP++ N   L+LC+  HAY EK GF  SD+R++
Sbjct: 228 HEEAAGLFWRMVAHFGMEPNEVTLLTIFPAISNLGALKLCQSVHAYAEKKGFKVSDVRIA 287

Query: 168 NSLIVVYAKCGNVEGASKVFDCISEDRKNVVSWTSIISCYATYGMVKEAVESFNKM 1
           NSLI  YAKCG +  ASKVF+ +S + KN+VSWTSIIS +  +GM KEA+ESF  M
Sbjct: 288 NSLIDCYAKCGCINSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIM 343



 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 2/153 (1%)
 Frame = -2

Query: 474 NVMITGFVKWGDVSKARELFDSMPD--KNVVSWTGIIDGYTRMNRADEALYLFRRMVDEG 301
           N +I  + K G ++ A ++F+ M    KN+VSWT II G+T      EA+  F  M  EG
Sbjct: 288 NSLIDCYAKCGCINSASKVFEEMSAEIKNLVSWTSIISGFTMHGMGKEAMESFEIMEKEG 347

Query: 300 IKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDIRVSNSLIVVYAKCGNVEGA 121
            +P+ +T L +  +  +   +E    F            DI    SLI +  + G +E A
Sbjct: 348 HEPNRVTFLSIVSACSHGGLVEEGLEFFEKMVAEYQIKPDIMHYGSLIDMLGRAGRIEEA 407

Query: 120 SKVFDCISEDRKNVVSWTSIISCYATYGMVKEA 22
            K+   I ++  +VV W +++   + +G V  A
Sbjct: 408 EKIALEIPKEIASVVIWRTLLGACSFHGNVSMA 440


>emb|CAN78346.1| hypothetical protein VITISV_033453 [Vitis vinifera]
          Length = 538

 Score =  205 bits (522), Expect = 3e-51
 Identities = 99/176 (56%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
 Frame = -2

Query: 525 DAHKLFDEMPHRNCVSWNVMITGFVKWGDVSKARELFDSMPDKNVVSWTGIIDGYTRMNR 346
           +A ++FDEMP RN V+WNV ITG  KWG++  AR L D MP   VVSWT IIDGYTRMN+
Sbjct: 143 EAKQVFDEMPVRNSVTWNVFITGLAKWGELHLARSLLDEMPMPTVVSWTTIIDGYTRMNQ 202

Query: 345 ADEALYLFRRM-VDEGIKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDIRVS 169
             +AL LF  M +DEGIKP+E+T+L +FP++ N   LE+C+  H Y EKSG + SDIR+ 
Sbjct: 203 PKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRIR 262

Query: 168 NSLIVVYAKCGNVEGASKVFDCISEDRKNVVSWTSIISCYATYGMVKEAVESFNKM 1
            SL+  YAKCG +E AS+VF  I    +N+VSWTSIIS +A +GM KEA+E+F +M
Sbjct: 263 TSLLDTYAKCGCIESASRVFGEIDAKSRNLVSWTSIISAFAMHGMAKEALENFERM 318



 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 2/149 (1%)
 Frame = -2

Query: 468 MITGFVKWGDVSKARELFDSMPDK--NVVSWTGIIDGYTRMNRADEALYLFRRMVDEGIK 295
           ++  + K G +  A  +F  +  K  N+VSWT II  +     A EAL  F RM  E +K
Sbjct: 265 LLDTYAKCGCIESASRVFGEIDAKSRNLVSWTSIISAFAMHGMAKEALENFERMQKECLK 324

Query: 294 PSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDIRVSNSLIVVYAKCGNVEGASK 115
           P+ +T L V  +  +   +E    F            D++    LI +  + G ++ A K
Sbjct: 325 PNRITFLSVLNACSHGGLVEEGLKFFTKMVNKYQISPDVKHYGCLIDMLGRAGRLDEAEK 384

Query: 114 VFDCISEDRKNVVSWTSIISCYATYGMVK 28
           +   I     NVV W +++   + +G V+
Sbjct: 385 MALEIPNYVVNVVIWRTLLGACSFHGNVE 413


>emb|CBI23162.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  201 bits (511), Expect = 6e-50
 Identities = 98/176 (55%), Positives = 127/176 (72%), Gaps = 1/176 (0%)
 Frame = -2

Query: 525 DAHKLFDEMPHRNCVSWNVMITGFVKWGDVSKARELFDSMPDKNVVSWTGIIDGYTRMNR 346
           +A ++FDEMP RN V+WNV ITG  KWG++  A  L D MP   VVSWT IIDGYTRMN+
Sbjct: 143 EAKQVFDEMPVRNSVTWNVFITGLAKWGELHLACSLLDEMPRPTVVSWTTIIDGYTRMNQ 202

Query: 345 ADEALYLFRRM-VDEGIKPSELTMLVVFPSVWNKRCLELCRCFHAYTEKSGFSGSDIRVS 169
             +AL LF  M +DEGIKP+E+T+L +FP++ N   LE+C+  H Y EKSG + SDIR+ 
Sbjct: 203 PKQALALFLTMFLDEGIKPTEITLLAIFPAISNLGALEICQLIHTYGEKSGLNASDIRIR 262

Query: 168 NSLIVVYAKCGNVEGASKVFDCISEDRKNVVSWTSIISCYATYGMVKEAVESFNKM 1
            SL+  YAKCG +E AS VF  I+   +N+VSWTSIIS +A +GM KEA+E+F +M
Sbjct: 263 TSLLDTYAKCGCIESASGVFGEIAAKGRNLVSWTSIISAFAMHGMAKEALENFERM 318


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