BLASTX nr result

ID: Angelica22_contig00037840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037840
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...    89   4e-16
ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...    76   3e-12
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...    64   1e-08
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...    56   4e-06

>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/86 (50%), Positives = 59/86 (68%)
 Frame = -2

Query: 260  DNHGIGGQNIEDMEDFRTTEKVSAKGPRPIVRCYEVNNGKHSVKSSTQVNSSHQHTDHNQ 81
            DN  +  +N+ED+EDFR  + +S  GPRPIV CY  N+ +HSVK++ +++SSHQ TD+ +
Sbjct: 1176 DNCMMDEENVEDLEDFRN-KSISTNGPRPIVHCYATNSEEHSVKATGRMDSSHQQTDNGE 1234

Query: 80   SVHELLRTQQQNEICMKDIDRNSDYQ 3
            SVHEL    QQ     + IDRN DYQ
Sbjct: 1235 SVHELSSLVQQTASSGESIDRNVDYQ 1260


>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 39/85 (45%), Positives = 51/85 (60%)
 Frame = -2

Query: 257  NHGIGGQNIEDMEDFRTTEKVSAKGPRPIVRCYEVNNGKHSVKSSTQVNSSHQHTDHNQS 78
            NH I  +NIED+EDFR   + S+ GPRPIVRCYEVN  + S   +   NS  +  +H++S
Sbjct: 1175 NHVISEENIEDLEDFRNKGRTSSAGPRPIVRCYEVNGKQQSDAMNCLANSPQEPANHSES 1234

Query: 77   VHELLRTQQQNEICMKDIDRNSDYQ 3
                L   Q  +I   +IDRN DYQ
Sbjct: 1235 A---LTPMQPTDISTDNIDRNVDYQ 1256


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 39/78 (50%), Positives = 49/78 (62%)
 Frame = -2

Query: 236  NIEDMEDFRTTEKVSAKGPRPIVRCYEVNNGKHSVKSSTQVNSSHQHTDHNQSVHELLRT 57
            N++D+EDF+     S   PRPIVRCY+VN  K S K + Q+NS+ Q TD   SVHEL   
Sbjct: 1181 NVKDLEDFQIKSS-SINRPRPIVRCYDVNE-KRSAKKTGQLNSAEQQTD---SVHELSSQ 1235

Query: 56   QQQNEICMKDIDRNSDYQ 3
             Q N    ++IDRN DYQ
Sbjct: 1236 PQHNTSYAENIDRNVDYQ 1253


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/77 (42%), Positives = 43/77 (55%)
 Frame = -2

Query: 233  IEDMEDFRTTEKVSAKGPRPIVRCYEVNNGKHSVKSSTQVNSSHQHTDHNQSVHELLRTQ 54
            + DMEDF    + S  GPRPI+R YE NN +HS K + Q +S  QH D +          
Sbjct: 1197 VNDMEDFGNKGRSSTLGPRPIIRHYEANNEQHSEKFNGQEDSEQQHIDSS-------NID 1249

Query: 53   QQNEICMKDIDRNSDYQ 3
            QQNE   +++DR  DYQ
Sbjct: 1250 QQNETSCENVDRTVDYQ 1266


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 28/83 (33%), Positives = 45/83 (54%)
 Frame = -2

Query: 254  HGIGGQNIEDMEDFRTTEKVSAKGPRPIVRCYEVNNGKHSVKSSTQVNSSHQHTDHNQSV 75
            H +   N ED+EDF+     S  GP+P+VRCY+V   KHS+ S  + NS  Q   ++   
Sbjct: 1176 HAVDEDNSEDLEDFQKKTS-STNGPKPVVRCYDVKGKKHSLTSDIETNSEMQENFNDGGF 1234

Query: 74   HELLRTQQQNEICMKDIDRNSDY 6
                  +  + + +++ID+N DY
Sbjct: 1235 ------EPSSPVDVENIDKNVDY 1251


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