BLASTX nr result
ID: Angelica22_contig00037777
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00037777
(256 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|2... 119 2e-25
ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containi... 106 2e-21
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi... 105 4e-21
emb|CBI23556.3| unnamed protein product [Vitis vinifera] 105 4e-21
ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 105 5e-21
>ref|XP_002321443.1| predicted protein [Populus trichocarpa] gi|222868439|gb|EEF05570.1|
predicted protein [Populus trichocarpa]
Length = 723
Score = 119 bits (299), Expect = 2e-25
Identities = 49/85 (57%), Positives = 68/85 (80%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
E++ F D+++ G YPN++CF+GV RAC + EN+ G ++FGF++KTGYFESD+CVGCAL
Sbjct: 25 EAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCAL 84
Query: 76 IDFFAKGLGDMKAARVVFDEMPERN 2
ID F KG GD+++A VFD MP+RN
Sbjct: 85 IDMFVKGNGDLESAYKVFDRMPDRN 109
Score = 61.2 bits (147), Expect = 8e-08
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
++V +F+D++ G P++F SGV+ AC + G V+K+G + D+CVGC+L
Sbjct: 128 DAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSG-LDLDVCVGCSL 186
Query: 76 IDFFAKGL--GDMKAARVVFDEMPERN 2
+D +AK + G + AR VFD MP N
Sbjct: 187 VDMYAKCVADGSVDDARKVFDRMPVHN 213
>ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 106 bits (265), Expect = 2e-21
Identities = 43/85 (50%), Positives = 65/85 (76%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
+++ F+D+++ G YPN++CF+ V+RAC + + G +++GFV+KTGY E+D+CVGC L
Sbjct: 160 QAIWTFLDMLELGFYPNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYLEADVCVGCEL 219
Query: 76 IDFFAKGLGDMKAARVVFDEMPERN 2
ID F KG GD+ +A VFD+MPERN
Sbjct: 220 IDMFVKGSGDLGSAYKVFDKMPERN 244
Score = 55.1 bits (131), Expect = 6e-06
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
+++ +F+D+ G P++F +S VL AC + G + VI+ G D+CVGC+L
Sbjct: 263 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG-LALDVCVGCSL 321
Query: 76 IDFFAK--GLGDMKAARVVFDEMPERN 2
+D +AK G + +R VF+ MPE N
Sbjct: 322 VDMYAKCAADGSVDDSRKVFERMPEHN 348
>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 105 bits (262), Expect = 4e-21
Identities = 43/85 (50%), Positives = 64/85 (75%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
+++ F+D+++ G YPN++CF+ V+RAC + G +++GFV+KTGY E+D+CVGC L
Sbjct: 111 QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCEL 170
Query: 76 IDFFAKGLGDMKAARVVFDEMPERN 2
ID F KG GD+ +A VFD+MPERN
Sbjct: 171 IDMFVKGSGDLGSAYKVFDKMPERN 195
Score = 55.8 bits (133), Expect = 4e-06
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
+++ +F+D+ G P++F +S VL AC + G + VI+ G D+CVGC+L
Sbjct: 214 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG-LALDVCVGCSL 272
Query: 76 IDFFAK--GLGDMKAARVVFDEMPERN 2
+D +AK G + +R VF++MPE N
Sbjct: 273 VDMYAKCAADGSVDDSRKVFEQMPEHN 299
>emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 105 bits (262), Expect = 4e-21
Identities = 43/85 (50%), Positives = 64/85 (75%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
+++ F+D+++ G YPN++CF+ V+RAC + G +++GFV+KTGY E+D+CVGC L
Sbjct: 129 QAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCEL 188
Query: 76 IDFFAKGLGDMKAARVVFDEMPERN 2
ID F KG GD+ +A VFD+MPERN
Sbjct: 189 IDMFVKGSGDLGSAYKVFDKMPERN 213
Score = 55.8 bits (133), Expect = 4e-06
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
+++ +F+D+ G P++F +S VL AC + G + VI+ G D+CVGC+L
Sbjct: 232 DAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLG-LALDVCVGCSL 290
Query: 76 IDFFAK--GLGDMKAARVVFDEMPERN 2
+D +AK G + +R VF++MPE N
Sbjct: 291 VDMYAKCAADGSVDDSRKVFEQMPEHN 317
>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 105 bits (261), Expect = 5e-21
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = -1
Query: 253 SVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCALI 74
++ FVD+I+ G YPN++CF+ RAC + E V G +FGFVIKTGY +SD+CVGC LI
Sbjct: 152 ALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLI 211
Query: 73 DFFAKGLGDMKAARVVFDEMPERN 2
D F KG GD+ +A VF++MPERN
Sbjct: 212 DMFVKGRGDLVSAFKVFEKMPERN 235
Score = 55.8 bits (133), Expect = 4e-06
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 ESVCVFVDIIKFGEYPNQFCFSGVLRACCSPENVDFGLVVFGFVIKTGYFESDLCVGCAL 77
E++ +F+D+I G P++F SGV+ AC + E + G + I+ G D CVGC L
Sbjct: 254 EAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHG-LTLDRCVGCCL 312
Query: 76 IDFFAKGL--GDMKAARVVFDEMPERN 2
I+ +AK G M AAR +FD++ + N
Sbjct: 313 INMYAKCSVDGSMCAARKIFDQILDHN 339