BLASTX nr result

ID: Angelica22_contig00037616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037616
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   172   3e-41
ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containi...   102   4e-20
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_003628782.1| Pentatricopeptide repeat-containing protein ...    99   3e-19

>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/125 (65%), Positives = 102/125 (81%)
 Frame = -3

Query: 375 EFKKALRCISDMRVNEILPDRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSW 196
           EFKKAL+CISDM+++ + PD+VTWN+IISG+A+ GQFEEA KY+ E+G   + K NVVSW
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 195 TALVTGLEQNGNYSQALCLFRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIK 16
           TAL+ G EQNG   +AL +FR+MV  GV+PNSITIAS VSA T LSL +HG+EIHGYCIK
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 15  TDELD 1
            +ELD
Sbjct: 391 VEELD 395



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/101 (35%), Positives = 65/101 (64%)
 Frame = -3

Query: 318 DRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSWTALVTGLEQNGNYSQALCL 139
           D V+WN++++G+A  G  EEA +   E+ ++  ++ ++++W  LVTG  Q G+   AL  
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEM-KFQGIEPDIITWNGLVTGFTQYGDGKAALEF 486

Query: 138 FRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIK 16
           F++M + G+ PN+ TI+  ++A  ++   K GKEIHGY ++
Sbjct: 487 FQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLR 527


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/125 (65%), Positives = 102/125 (81%)
 Frame = -3

Query: 375 EFKKALRCISDMRVNEILPDRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSW 196
           EFKKAL+CISDM+++ + PD+VTWN+IISG+A+ GQFEEA KY+ E+G   + K NVVSW
Sbjct: 271 EFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSW 330

Query: 195 TALVTGLEQNGNYSQALCLFRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIK 16
           TAL+ G EQNG   +AL +FR+MV  GV+PNSITIAS VSA T LSL +HG+EIHGYCIK
Sbjct: 331 TALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK 390

Query: 15  TDELD 1
            +ELD
Sbjct: 391 VEELD 395



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/101 (35%), Positives = 65/101 (64%)
 Frame = -3

Query: 318 DRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSWTALVTGLEQNGNYSQALCL 139
           D V+WN++++G+A  G  EEA +   E+ ++  ++ ++++W  LVTG  Q G+   AL  
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEM-KFQGIEPDIITWNGLVTGFTQYGDGKAALEF 486

Query: 138 FRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIK 16
           F++M + G+ PN+ TI+  ++A  ++   K GKEIHGY ++
Sbjct: 487 FQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLR 527


>ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/119 (40%), Positives = 78/119 (65%)
 Frame = -3

Query: 366 KALRCISDMRVNEILPDRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSWTAL 187
           +AL+    M++  + P+ V+WNS+I GF ++GQ  EA   + E+     V  N+++WT +
Sbjct: 441 EALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCS-SGVMPNLITWTTM 499

Query: 186 VTGLEQNGNYSQALCLFRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIKTD 10
           ++GL QNG  S A+ +FR+M   G+RPNS++I S +S  T ++L KHG+ IHGY ++ D
Sbjct: 500 MSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRD 558


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/119 (42%), Positives = 76/119 (63%)
 Frame = -3

Query: 372 FKKALRCISDMRVNEILPDRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSWT 193
           F  A R ++ M+   I PD +TWNS+++G++  G  +EA    H++ +   +  NVVSWT
Sbjct: 39  FDHAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDI-KISGLTPNVVSWT 97

Query: 192 ALVTGLEQNGNYSQALCLFRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIK 16
           AL++G  QNGNYS+++  F QM   G++PNS TI+S++     LSL + GKEIH   I+
Sbjct: 98  ALISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIR 156


>ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522804|gb|AET03258.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/117 (41%), Positives = 78/117 (66%)
 Frame = -3

Query: 366 KALRCISDMRVNEILPDRVTWNSIISGFARDGQFEEAYKYYHELGRWDNVKANVVSWTAL 187
           +AL+    M++  + P+ V+WNS+I GF R+GQ  EA   + E+ +   V  N+++WT +
Sbjct: 501 EALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM-QLSGVTPNLITWTTM 559

Query: 186 VTGLEQNGNYSQALCLFRQMVTAGVRPNSITIASVVSASTKLSLYKHGKEIHGYCIK 16
           ++GL QNG   +A  +F+QM  AG+RPNSI+I S +SA T ++L  +G+ IHGY ++
Sbjct: 560 ISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMR 616


Top