BLASTX nr result

ID: Angelica22_contig00037604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037604
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...    76   2e-12
gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]                          75   7e-12
ref|NP_192066.2| pentatricopeptide repeat-containing protein [Ar...    75   7e-12
ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/82 (41%), Positives = 54/82 (65%)
 Frame = -1

Query: 250 GHKPDNVTYGTLLSGLCKNHYVHKALSLFQAMECNGLVPESKTYNIIVRGCLRNKKYSEA 71
           GH+PDN TY  L+ G CK++ +  A+ +F  M+ NG VP++  YN ++ G L+ +K +EA
Sbjct: 317 GHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVPDTVVYNCLLDGTLKARKVTEA 376

Query: 70  CKLVDKMVDCGFLADAFTTSLL 5
           C+L +KMV  G  A  +T ++L
Sbjct: 377 CQLFEKMVQEGVRASCWTYNIL 398


>gb|AAC62783.1| F11O4.7 [Arabidopsis thaliana]
          Length = 508

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/82 (40%), Positives = 54/82 (65%)
 Frame = -1

Query: 250 GHKPDNVTYGTLLSGLCKNHYVHKALSLFQAMECNGLVPESKTYNIIVRGCLRNKKYSEA 71
           GH+PDN TY  L+ G CK++ +  A+ ++  M+ NG VP++  YN ++ G L+ +K +EA
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378

Query: 70  CKLVDKMVDCGFLADAFTTSLL 5
           C+L +KMV  G  A  +T ++L
Sbjct: 379 CQLFEKMVQEGVRASCWTYNIL 400


>ref|NP_192066.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75161629|sp|Q8VZE4.1|PP299_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g01570 gi|18086402|gb|AAL57659.1| AT4g01570/T15B16_21
           [Arabidopsis thaliana] gi|24797024|gb|AAN64524.1|
           At4g01570/T15B16_21 [Arabidopsis thaliana]
           gi|332656643|gb|AEE82043.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 805

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 33/82 (40%), Positives = 54/82 (65%)
 Frame = -1

Query: 250 GHKPDNVTYGTLLSGLCKNHYVHKALSLFQAMECNGLVPESKTYNIIVRGCLRNKKYSEA 71
           GH+PDN TY  L+ G CK++ +  A+ ++  M+ NG VP++  YN ++ G L+ +K +EA
Sbjct: 319 GHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEA 378

Query: 70  CKLVDKMVDCGFLADAFTTSLL 5
           C+L +KMV  G  A  +T ++L
Sbjct: 379 CQLFEKMVQEGVRASCWTYNIL 400


>ref|XP_002310676.1| predicted protein [Populus trichocarpa] gi|222853579|gb|EEE91126.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 35/83 (42%), Positives = 54/83 (65%)
 Frame = -1

Query: 250 GHKPDNVTYGTLLSGLCKNHYVHKALSLFQAMECNGLVPESKTYNIIVRGCLRNKKYSEA 71
           G KPD  TY  L+ GLC+   + +AL LF+ ME +G +P S +YN++++GCL++   S  
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTV 374

Query: 70  CKLVDKMVDCGFLADAFTTSLLQ 2
            +L+ +M D GF ADA T + L+
Sbjct: 375 VQLIHEMADRGFYADAVTRTFLK 397


>ref|XP_002320961.1| predicted protein [Populus trichocarpa] gi|222861734|gb|EEE99276.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/89 (42%), Positives = 57/89 (64%)
 Frame = -1

Query: 271 FYKIQDLGHKPDNVTYGTLLSGLCKNHYVHKALSLFQAMECNGLVPESKTYNIIVRGCLR 92
           F ++ D G KP+  TY  L+  LCK   + +A  LF+ ME +G  P+   YN+I++G L+
Sbjct: 365 FSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQ 424

Query: 91  NKKYSEACKLVDKMVDCGFLADAFTTSLL 5
           +K  S A +LV++MV+ GF ADA T +LL
Sbjct: 425 HKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/82 (31%), Positives = 46/82 (56%)
 Frame = -1

Query: 250 GHKPDNVTYGTLLSGLCKNHYVHKALSLFQAMECNGLVPESKTYNIIVRGCLRNKKYSEA 71
           GH P+ +TYG LL GLCK+  + +A +LFQ M+ + + P    Y I++    +  K  + 
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361

Query: 70  CKLVDKMVDCGFLADAFTTSLL 5
            +L  +++D G   + +T + L
Sbjct: 362 KELFSRLIDEGLKPNVYTYTAL 383


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