BLASTX nr result

ID: Angelica22_contig00037420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037420
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...    61   8e-08
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indi...    57   2e-06

>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 321 SLFQEGRYSEAKDLLYKCPLHIRKHKAICSLFGSLETRTTASS 193
           S F EGRYSEAKDLL+KCP HIRKH  +C LFGS E+ TTA++
Sbjct: 581 SFFNEGRYSEAKDLLFKCPHHIRKHNEVCKLFGSAESNTTAAT 623


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -1

Query: 321 SLFQEGRYSEAKDLLYKCPLHIRKHKAICSLFGSLET 211
           S FQEGR SEAKDLLYKCP HIRKH  IC LFGS ++
Sbjct: 588 SFFQEGRESEAKDLLYKCPHHIRKHPDICKLFGSAKS 624


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = -1

Query: 321 SLFQEGRYSEAKDLLYKCPLHIRKHKAICSLFGSLETRT 205
           SLF+EGR SEAKDLLYK P HIR H  IC LFGS ET++
Sbjct: 587 SLFREGRLSEAKDLLYKTPHHIRTHSKICKLFGSSETKS 625


>ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Brachypodium distachyon]
          Length = 585

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -1

Query: 321 SLFQEGRYSEAKDLLYKCPLHIRKHKAICSLFGSLETRTTA 199
           S F EGRYSEA+DLLYKCP+HIR+H  I  LF S++  TT+
Sbjct: 545 SFFAEGRYSEAQDLLYKCPIHIRRHHDITKLFESIKVETTS 585


>gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indica Group]
          Length = 573

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = -1

Query: 321 SLFQEGRYSEAKDLLYKCPLHIRKHKAICSLFGSLETRTTASS 193
           S F EGRYSEA+DLLYKCP HIRKH  +  LF S++  + +++
Sbjct: 531 SFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFESIKVESESAA 573


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