BLASTX nr result

ID: Angelica22_contig00037320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037320
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    71   8e-11
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    71   8e-11

>ref|XP_002309408.1| predicted protein [Populus trichocarpa] gi|222855384|gb|EEE92931.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 33/81 (40%), Positives = 59/81 (72%)
 Frame = +3

Query: 12  SLSSNITYITDVFNRVEQPNIYLWNTLIKLQAQHSTIEESFLLFRRMMRCSSVCADKYTF 191
           S+S++++Y T +FNR+  P+ +L+N L+K+ +++S   ++F LF RM +     +DKYT+
Sbjct: 49  SISTSVSYSTSIFNRLLNPSTFLYNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTY 108

Query: 192 PSLVKLCARELAVREGGVVHG 254
           P L+K+C+ EL ++EG +VHG
Sbjct: 109 PLLIKVCSNELRLKEGEIVHG 129


>ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/84 (40%), Positives = 51/84 (60%)
 Frame = +3

Query: 12  SLSSNITYITDVFNRVEQPNIYLWNTLIKLQAQHSTIEESFLLFRRMMRCSSVCADKYTF 191
           S  S + Y  +VFN++ QPN+Y WNTLI+  A  S   +SFL+F  M+   S   +K+TF
Sbjct: 117 SSCSCLIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTF 176

Query: 192 PSLVKLCARELAVREGGVVHGLIV 263
           P L K  +R   +  G V+HG+++
Sbjct: 177 PFLFKAASRLKVLHLGSVLHGMVI 200


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = +3

Query: 3   LYNSLSSNITYITDVFNRVEQPNIYLWNTLIKLQAQHSTIEESFLLFRRMMRCSSVCADK 182
           L NSLS N +Y T VFN V  P+  LWNT IK  +++ ++  +  LF RM R  +V  DK
Sbjct: 114 LCNSLS-NFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAV-PDK 171

Query: 183 YTFPSLVKLCARELAVREGGVVHGLIV 263
           +T+PSL+K C++   V+EG   HG  V
Sbjct: 172 FTYPSLIKACSKVCGVKEGVAFHGSAV 198


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = +3

Query: 3   LYNSLSSNITYITDVFNRVEQPNIYLWNTLIKLQAQHSTIEESFLLFRRMMRCSSVCADK 182
           L NSLS N +Y T VFN V  P+  LWNT IK  +++ ++  +  LF RM R  +V  DK
Sbjct: 66  LCNSLS-NFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAV-PDK 123

Query: 183 YTFPSLVKLCARELAVREGGVVHGLIV 263
           +T+PSL+K C++   V+EG   HG  V
Sbjct: 124 FTYPSLIKACSKVCGVKEGVAFHGSAV 150


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = +3

Query: 3   LYNSLSSNITYITDVFNRVEQPNIYLWNTLIKLQAQHSTIEESFLLFRRMMRCSSVCADK 182
           L NSLS N +Y T VFN V  P+  LWNT IK  +++ ++  +  LF RM R  +V  DK
Sbjct: 66  LCNSLS-NFSYTTSVFNGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAV-PDK 123

Query: 183 YTFPSLVKLCARELAVREGGVVHGLIV 263
           +T+PSL+K C++   V+EG   HG  V
Sbjct: 124 FTYPSLIKACSKVCGVKEGVAFHGSAV 150


Top