BLASTX nr result

ID: Angelica22_contig00037289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037289
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago trunc...    72   3e-14
ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-14
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...    69   1e-13
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...    69   1e-13
ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana] ...    69   1e-13

>ref|XP_003615596.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355516931|gb|AES98554.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 892

 Score = 72.4 bits (176), Expect(2) = 3e-14
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = +1

Query: 1   RRFNPNWFNEYKLWLEYSVEKEAAFYLYCYLFKYD--NKQGGDAFVKEGFDARNK 159
           RRF P+WFNE+  WLEYS+EK+AAF L CYLF+ D   + GGD F+ EGF + NK
Sbjct: 189 RRFCPSWFNEFGNWLEYSIEKDAAFCLCCYLFRPDFGKQAGGDTFITEGFTSWNK 243



 Score = 30.8 bits (68), Expect(2) = 3e-14
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 186 GPNSAHNQARRKCEDLM 236
           GPNSAHN A +KC DLM
Sbjct: 254 GPNSAHNIAWKKCGDLM 270


>ref|XP_002319808.1| predicted protein [Populus trichocarpa] gi|222858184|gb|EEE95731.1|
           predicted protein [Populus trichocarpa]
          Length = 788

 Score = 69.3 bits (168), Expect(2) = 4e-14
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = +1

Query: 1   RRFNPNWFNEYKLWLEYSVEKEAAFYLYCYLFKYDNKQGGDAFVKEGF 144
           RRFNP WF  Y  WLEYS+ K+AAF LYCYLFK  +K G D+FV EGF
Sbjct: 91  RRFNPAWFGAYPTWLEYSIAKDAAFCLYCYLFK--SKGGVDSFVGEGF 136



 Score = 33.1 bits (74), Expect(2) = 4e-14
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +3

Query: 153 EQK*RLDFLVGGPNSAHNQARRKCEDLM 236
           ++K R D  +G  NS HN AR KCE+LM
Sbjct: 140 KKKERFDLHIGKSNSCHNVARIKCENLM 167


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score = 68.9 bits (167), Expect(2) = 1e-13
 Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +1

Query: 1   RRFNPNWFNEYKLWLEYSVEKEAAFYLYCYLFK--YDNKQGGDAFVKEGFDARNK 159
           RRFNP WF+ Y  WLEYSVEKE AF LYCYLF+    N+ G D+F+  GF + NK
Sbjct: 110 RRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNK 164



 Score = 32.0 bits (71), Expect(2) = 1e-13
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 165 RLDFLVG-GPNSAHNQARRKCEDLM 236
           RLD  VG   NS HN A+RKCEDLM
Sbjct: 167 RLDQHVGLDVNSFHNNAKRKCEDLM 191


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score = 68.9 bits (167), Expect(2) = 1e-13
 Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +1

Query: 1   RRFNPNWFNEYKLWLEYSVEKEAAFYLYCYLFK--YDNKQGGDAFVKEGFDARNK 159
           RRFNP WF+ Y  WLEYSVEKE AF LYCYLF+    N+ G D+F+  GF + NK
Sbjct: 68  RRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQTGNQGGSDSFLSTGFCSWNK 122



 Score = 32.0 bits (71), Expect(2) = 1e-13
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 165 RLDFLVG-GPNSAHNQARRKCEDLM 236
           RLD  VG   NS HN A+RKCEDLM
Sbjct: 125 RLDQHVGLDVNSFHNNAKRKCEDLM 149


>ref|NP_192704.1| uncharacterized protein [Arabidopsis thaliana]
           gi|4538896|emb|CAB39633.1| putative protein [Arabidopsis
           thaliana] gi|7267661|emb|CAB78089.1| putative protein
           [Arabidopsis thaliana] gi|332657378|gb|AEE82778.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 664

 Score = 68.9 bits (167), Expect(2) = 1e-13
 Identities = 33/55 (60%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
 Frame = +1

Query: 1   RRFNPNWFNEYKLWLEYSVEKEAAFYLYCYLFK--YDNKQGGDAFVKEGFDARNK 159
           RRFNP WF+ Y  WLEYSVEKE AF LYCYLF+    N+ G D+F+  GF + NK
Sbjct: 68  RRFNPKWFDLYGDWLEYSVEKEKAFCLYCYLFRDQAGNQGGSDSFLSTGFCSWNK 122



 Score = 32.0 bits (71), Expect(2) = 1e-13
 Identities = 17/25 (68%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +3

Query: 165 RLDFLVG-GPNSAHNQARRKCEDLM 236
           RLD  VG   NS HN A+RKCEDLM
Sbjct: 125 RLDQHVGLDVNSFHNNAKRKCEDLM 149


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