BLASTX nr result

ID: Angelica22_contig00037284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037284
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...   108   5e-22
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   101   7e-20
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    96   2e-18
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    96   2e-18
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]    96   3e-18

>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
 Frame = -1

Query: 334 SVNEAQVWHQRLGHLPFQQMKVV--FPEAQESLHTCVCQICPAARQVRQSFPTSSIKSDK 161
           S++E+++WH RLGHLPF  MK +   P   ++  T  C ICP ARQ +  FP+S+IKS +
Sbjct: 9   SMDESKLWHFRLGHLPFHAMKTIKTLPVTVDNKQTFPCDICPMARQSKPPFPSSTIKSKQ 68

Query: 160 PFQLLHIDV*GPYRVKSITGCTQFLAIIDDFTRFTWTRLLKCKSEVSSVLE 8
            F+L+HID  GPY V +  G   FL I+DDF+R TWT LL  KS   + L+
Sbjct: 69  CFELIHIDTWGPYNVPTYKGERYFLTIVDDFSRATWTYLLTTKSNAFATLK 119


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322 AQVWHQRLGHL---PFQQMKVVFPEAQ-ESLHTCVCQICPAARQVRQSFPTSSIKSDKPF 155
           + +WHQRLGH    P Q +  V P+   +S H  VC ICP A+Q R SFP+S I S  PF
Sbjct: 536 SDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKH--VCDICPLAKQTRLSFPSSFISSHAPF 593

Query: 154 QLLHIDV*GPYRVKSITGCTQFLAIIDDFTRFTWTRLLKCKSEVSSVLEIY 2
            L+H D+ GP+R+ S +G   FL I+DD TR+TW  L+  KSE   +L+ +
Sbjct: 594 DLIHCDIWGPHRINSHSGAXYFLTIVDDHTRYTWIHLMSFKSETQGILQSF 644


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -1

Query: 352 SVTRLTSVNEAQVWHQRLGHLPFQQMKVV--FPEAQESLHTCVCQICPAARQVRQSFPTS 179
           +V ++    +  +WHQRLGH  F  +  +  F  +  S+ +  C +C  A+Q R+ FP S
Sbjct: 500 TVHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDS 559

Query: 178 SIKSDKPFQLLHIDV*GPYRVKSITGCTQFLAIIDDFTRFTWTRLLKCKSEVSSVL 11
           S KS   F L+H DV GPYRV S  G   FL I+DDF+R  WT LL  KSEV SVL
Sbjct: 560 SNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVL 615


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/116 (44%), Positives = 68/116 (58%), Gaps = 2/116 (1%)
 Frame = -1

Query: 352 SVTRLTSVNEAQVWHQRLGHLPFQQMKVV--FPEAQESLHTCVCQICPAARQVRQSFPTS 179
           +V ++    +  +WHQRLGH  F  +  +  F  +  S+ +  C +C  A+Q R+ FP S
Sbjct: 500 TVHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSRSCDVCFRAKQTREVFPDS 559

Query: 178 SIKSDKPFQLLHIDV*GPYRVKSITGCTQFLAIIDDFTRFTWTRLLKCKSEVSSVL 11
           S KS   F L+H DV GPYRV S  G   FL I+DDF+R  WT LL  KSEV SVL
Sbjct: 560 SNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLTIVDDFSRSVWTYLLLAKSEVRSVL 615


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/111 (45%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
 Frame = -1

Query: 322 AQVWHQRLGHL---PFQQMKVVFPEAQ-ESLHTCVCQICPAARQVRQSFPTSSIKSDKPF 155
           + +WHQRLGH    P Q +  V  E   +S H  VC I P A+Q R SFP+S I S  PF
Sbjct: 128 SDLWHQRLGHPSSGPLQVLAKVNXEIYFDSKH--VCDIXPLAKQTRLSFPSSFISSHAPF 185

Query: 154 QLLHIDV*GPYRVKSITGCTQFLAIIDDFTRFTWTRLLKCKSEVSSVLEIY 2
            L+H D+ GP+R+ S +G   FL I+DD TR+TW  L+  KSE   +L+ +
Sbjct: 186 DLIHCDIWGPHRINSHSGARYFLTIVDDHTRYTWIHLMSFKSETQGILQSF 236


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