BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037267
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    76   2e-12
ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]                 60   2e-07
ref|NP_568460.1| pentatricopeptide repeat-containing protein [Ar...    60   2e-07
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...    57   1e-06

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 13/118 (11%)
 Frame = +1

Query: 67  SVLFLRLFNSSIQIFDSIKFNICQKIK----------LDKRPNG---LIPSCLDDIIANV 207
           S +F RLFN+ I+   SIK ++ Q              + RP+G   L+P  L+D+I +V
Sbjct: 10  SHVFFRLFNACIE---SIKHDVAQIFANVFSFKPYSPANNRPSGHGNLLPFALEDLIISV 66

Query: 208 GTQCQNKSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENISWAHLGVTG 381
           G Q Q  ++  FS NK    +  P  VFNVLD +LK SL+RLK MRE++S   +G+ G
Sbjct: 67  GNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMRESVSLTKIGLNG 124


>ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
           gi|449499387|ref|XP_004160802.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
          Length = 633

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/64 (46%), Positives = 40/64 (62%)
 Frame = +1

Query: 184 LDDIIANVGTQCQNKSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENISWA 363
           L  ++  VG  C  +S   FS+ ++   +  P AVFNVLD +LKGSLDRLK MRE+I  A
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLA 120

Query: 364 HLGV 375
             G+
Sbjct: 121 KSGL 124


>dbj|BAC41999.1| unknown protein [Arabidopsis thaliana]
          Length = 593

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/106 (33%), Positives = 52/106 (49%)
 Frame = +1

Query: 46  CIAAVDTSVLFLRLFNSSIQIFDSIKFNICQKIKLDKRPNGLIPSCLDDIIANVGTQCQN 225
           C     +     RL N S+         +   I  + R   +  SC++   +  G     
Sbjct: 7   CGEVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDLEMRLSCIERPPSISGNHSHL 66

Query: 226 KSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENISWA 363
            ++K FSD KD   KE PEA+FNVLD +LK SLDRL ++RE++  A
Sbjct: 67  CTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQA 112


>ref|NP_568460.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75154065|sp|Q8L6Y3.1|PP396_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g24830 gi|22655280|gb|AAM98230.1| putative protein
           [Arabidopsis thaliana] gi|30725398|gb|AAP37721.1|
           At5g24830 [Arabidopsis thaliana]
           gi|332005984|gb|AED93367.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 593

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 35/103 (33%), Positives = 51/103 (49%)
 Frame = +1

Query: 46  CIAAVDTSVLFLRLFNSSIQIFDSIKFNICQKIKLDKRPNGLIPSCLDDIIANVGTQCQN 225
           C     +     RL N S+         +   I  + R   +  SC++   +  G     
Sbjct: 7   CGEVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLSCIERPPSISGNHSHL 66

Query: 226 KSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMRENI 354
            ++K FSD KD   KE PEA+FNVLD +LK SLDRL ++RE++
Sbjct: 67  CTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESV 109


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
 Frame = +1

Query: 52  AAVDTSVLFLRLFNSSIQIFDSIKFNICQKI-KLDKRPNGLIPSC---LDDIIANVGTQC 219
           ++  + +  LRL + ++   D+IK +  Q    +  R + + P+     DD++  +  +C
Sbjct: 11  SSASSHIFLLRLLDRAM---DTIKHHTAQIFANIFCRESIIDPNASYFFDDMVKTLSNRC 67

Query: 220 QNKSKKLFSDNKDSGNKEQPEAVFNVLDEMLKGSLDRLKAMREN--ISWAHLGVTG 381
                +L  DNK+  +++ P+ VFNVLD MLKGSL+RLK+MRE+  IS   +G+ G
Sbjct: 68  -----RLRRDNKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVKVGLAG 118