BLASTX nr result

ID: Angelica22_contig00037169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00037169
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   149   2e-34
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   148   5e-34
ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding pro...   138   4e-31

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/93 (84%), Positives = 84/93 (90%)
 Frame = -3

Query: 280 AQKEMWGATTKVVITKDSTLIVTDGSTQATVKKRVSQIENLVKNTKENFQKKILNERIAR 101
           A KE+ G  TKVVITKDSTLIVTDGSTQ  V+KRVSQI  LV+NT+ENFQKKILNERIAR
Sbjct: 338 AGKEVLGTATKVVITKDSTLIVTDGSTQPAVEKRVSQIRGLVENTEENFQKKILNERIAR 397

Query: 100 LSGGIAIIQVGAQTQVEQKDKQLRIEDAVNATK 2
           LSGGIAI+QVGAQTQVE KDKQLRIEDAVNATK
Sbjct: 398 LSGGIAILQVGAQTQVELKDKQLRIEDAVNATK 430


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/93 (84%), Positives = 84/93 (90%)
 Frame = -3

Query: 280 AQKEMWGATTKVVITKDSTLIVTDGSTQATVKKRVSQIENLVKNTKENFQKKILNERIAR 101
           A KE+ G  TKVVITKDSTLIVTDGSTQ  V+KRVSQI  LV+NT+ENFQKKILNERIAR
Sbjct: 312 AGKEVLGTATKVVITKDSTLIVTDGSTQPAVEKRVSQIRGLVENTEENFQKKILNERIAR 371

Query: 100 LSGGIAIIQVGAQTQVEQKDKQLRIEDAVNATK 2
           LSGGIAI+QVGAQTQVE KDKQLRIEDAVNATK
Sbjct: 372 LSGGIAILQVGAQTQVELKDKQLRIEDAVNATK 404


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score =  148 bits (373), Expect = 5e-34
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = -3

Query: 274 KEMWGATTKVVITKDSTLIVTDGSTQATVKKRVSQIENLVKNTKENFQKKILNERIARLS 95
           KE+ G+ TKVVITKDSTLIVTDGSTQA V+KRVSQI  L +NT+ENFQKKILNERIARLS
Sbjct: 349 KEVLGSATKVVITKDSTLIVTDGSTQAAVQKRVSQIRGLAENTEENFQKKILNERIARLS 408

Query: 94  GGIAIIQVGAQTQVEQKDKQLRIEDAVNATK 2
           GGIAI+QVGAQTQVE KDKQLRIEDA+NATK
Sbjct: 409 GGIAILQVGAQTQVELKDKQLRIEDALNATK 439


>ref|XP_002315987.1| predicted protein [Populus trichocarpa] gi|222865027|gb|EEF02158.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score =  140 bits (353), Expect = 1e-31
 Identities = 75/93 (80%), Positives = 83/93 (89%)
 Frame = -3

Query: 280 AQKEMWGATTKVVITKDSTLIVTDGSTQATVKKRVSQIENLVKNTKENFQKKILNERIAR 101
           A KE+ G  TKVVITKDSTLIVTDGST+  V+KRVSQI +LV+NT+E FQKKILNERIAR
Sbjct: 290 AGKEVLGTATKVVITKDSTLIVTDGSTREAVEKRVSQICSLVENTEEKFQKKILNERIAR 349

Query: 100 LSGGIAIIQVGAQTQVEQKDKQLRIEDAVNATK 2
           LSGGIAI+QVGAQTQVE KDK LRIEDA+NATK
Sbjct: 350 LSGGIAILQVGAQTQVELKDKLLRIEDALNATK 382


>ref|XP_003516734.1| PREDICTED: ruBisCO large subunit-binding protein subunit beta,
           chloroplastic-like [Glycine max]
          Length = 575

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/93 (78%), Positives = 81/93 (87%)
 Frame = -3

Query: 280 AQKEMWGATTKVVITKDSTLIVTDGSTQATVKKRVSQIENLVKNTKENFQKKILNERIAR 101
           A K   G+ TKVVITK+STLIVTDGST+  V+KRV Q+  LV+NT ENFQKKILNERIAR
Sbjct: 312 AHKNDLGSATKVVITKNSTLIVTDGSTREAVEKRVCQLRRLVENTVENFQKKILNERIAR 371

Query: 100 LSGGIAIIQVGAQTQVEQKDKQLRIEDAVNATK 2
           LSGGIAI+QVGAQTQVE KDKQLRIEDA+NATK
Sbjct: 372 LSGGIAILQVGAQTQVELKDKQLRIEDALNATK 404


Top