BLASTX nr result
ID: Angelica22_contig00037015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00037015
(696 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 174 5e-52
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 171 2e-51
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 171 4e-51
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 161 1e-49
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 162 2e-49
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 174 bits (441), Expect(2) = 5e-52
Identities = 85/166 (51%), Positives = 117/166 (70%)
Frame = +2
Query: 26 VLTNEFTSDDILKTLKSMGKNRSPGPDGFPVEFYLSTWHIIGPYVTSGILYFFESLSLPR 205
+LT T ++I K + SM K++SPGPDG+ EFY ++W IIG V I FF LP+
Sbjct: 169 LLTRVVTGEEIKKVIFSMPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPK 228
Query: 206 VVNAAAICLVPKQQNASEMKHFRPISCCNVLYKCIAKMLASRLKRVIPSIISPVQSAFVP 385
VN+ + L+PK++ A E+K +RPISCCNVLYK I+K+LA+RLKR++P I QSAFV
Sbjct: 229 GVNSTILALIPKKKEAREIKDYRPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVK 288
Query: 386 NRIIGDNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFIS 523
+R++ +NV L L KDYH +S +RCA+K+DI KAFD L WSF++
Sbjct: 289 DRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLT 334
Score = 56.6 bits (135), Expect(2) = 5e-52
Identities = 24/53 (45%), Positives = 36/53 (67%)
Frame = +1
Query: 538 MGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 696
M FP +FI W+ +C+++ FS+++NG L G+F+ G RQG L YLFV+ M
Sbjct: 340 MNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISM 392
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 171 bits (433), Expect(2) = 2e-51
Identities = 83/166 (50%), Positives = 112/166 (67%)
Frame = +2
Query: 23 SVLTNEFTSDDILKTLKSMGKNRSPGPDGFPVEFYLSTWHIIGPYVTSGILYFFESLSLP 202
++LT E T ++I K L +M N+SPGPDG+ EF+ +TW + GP + I FF LP
Sbjct: 744 NILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLP 803
Query: 203 RVVNAAAICLVPKQQNASEMKHFRPISCCNVLYKCIAKMLASRLKRVIPSIISPVQSAFV 382
+ +NA + L+PK+ A EMK +RPISCCNVLYK I+K+LA+RLK ++PS I QSAFV
Sbjct: 804 KGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFV 863
Query: 383 PNRIIGDNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 520
R++ +NV L L KDYH S RCA+K+DI KAFD + W F+
Sbjct: 864 KERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFL 909
Score = 57.8 bits (138), Expect(2) = 2e-51
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 526 TMKRMGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 696
T++ + FP+ F W+K+CI++ FSV++NG L GFF G RQG L YLFV+ M
Sbjct: 912 TLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICM 968
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 171 bits (434), Expect(2) = 4e-51
Identities = 83/172 (48%), Positives = 120/172 (69%)
Frame = +2
Query: 8 TSHQASVLTNEFTSDDILKTLKSMGKNRSPGPDGFPVEFYLSTWHIIGPYVTSGILYFFE 187
T+ +LT E +S++I L SM K++SPGPDG+ EFY +TW IIG T + FF+
Sbjct: 89 TNSDNEMLTREVSSEEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFFQ 148
Query: 188 SLSLPRVVNAAAICLVPKQQNASEMKHFRPISCCNVLYKCIAKMLASRLKRVIPSIISPV 367
LP+ +N+ + L+PK+ A EM+ +RPISCCNVLYK I+K++A+RLK ++P I+
Sbjct: 149 KGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRFIAEN 208
Query: 368 QSAFVPNRIIGDNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFIS 523
QSAFV +R++ +N+ L L KDYH +S +RCAIK+DI KAFD + WSF++
Sbjct: 209 QSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLT 260
Score = 56.2 bits (134), Expect(2) = 4e-51
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 526 TMKRMGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 696
T+ M F FI W+ +CIT+ FSV++NG L G+F+ + G RQG L YLFV+ M
Sbjct: 262 TLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICM 318
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 161 bits (408), Expect(2) = 1e-49
Identities = 79/165 (47%), Positives = 112/165 (67%)
Frame = +2
Query: 26 VLTNEFTSDDILKTLKSMGKNRSPGPDGFPVEFYLSTWHIIGPYVTSGILYFFESLSLPR 205
+LT ++++I K L SM ++SPGPDGF EF+ +W I+GP I FF LP+
Sbjct: 1 MLTRVVSAEEIKKVLFSMPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPK 60
Query: 206 VVNAAAICLVPKQQNASEMKHFRPISCCNVLYKCIAKMLASRLKRVIPSIISPVQSAFVP 385
VN+ + L+PK+ + EMK +RPISCCNV+YK I+K+LA+RLK ++P I+ QS+FV
Sbjct: 61 GVNSTILALIPKKLESKEMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVK 120
Query: 386 NRIIGDNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 520
+R++ +NV L L KDYH +S RCAIK+DI KA D + WSF+
Sbjct: 121 DRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFL 165
Score = 61.2 bits (147), Expect(2) = 1e-49
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +1
Query: 526 TMKRMGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 696
T+ M FP+ FI W+++CIT+ FSV++NG L GFF+ G RQG L YLFV+ M
Sbjct: 168 TLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICM 224
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 162 bits (411), Expect(2) = 2e-49
Identities = 78/164 (47%), Positives = 111/164 (67%)
Frame = +2
Query: 29 LTNEFTSDDILKTLKSMGKNRSPGPDGFPVEFYLSTWHIIGPYVTSGILYFFESLSLPRV 208
L T+++I K L M ++SPGPDG+ EF+ +TW IIG T + FF LP+
Sbjct: 449 LIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKG 508
Query: 209 VNAAAICLVPKQQNASEMKHFRPISCCNVLYKCIAKMLASRLKRVIPSIISPVQSAFVPN 388
+N+ + L+PK+ A EMK +RPISCCNVLYK I+K++A+RLK V+P I+ QSAFV +
Sbjct: 509 INSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKD 568
Query: 389 RIIGDNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 520
R++ +N+ L L KDYH ++ +RCAIK+DI KAFD + W F+
Sbjct: 569 RLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFL 612
Score = 59.7 bits (143), Expect(2) = 2e-49
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 538 MGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 696
+GFP +FI W+ ICIT+ FSV++NG L G+F+ G RQG L YLFV+ M
Sbjct: 619 LGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICM 671