BLASTX nr result

ID: Angelica22_contig00036997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036997
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [S...    92   6e-17
ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [S...    91   8e-17
gb|ABA92870.2| retrotransposon protein, putative, unclassified [...    91   1e-16
gb|ACE86410.1| putative retroelement protein [Sorghum bicolor]         90   2e-16
ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group] g...    89   3e-16

>ref|XP_002450635.1| hypothetical protein SORBIDRAFT_05g008466 [Sorghum bicolor]
            gi|241936478|gb|EES09623.1| hypothetical protein
            SORBIDRAFT_05g008466 [Sorghum bicolor]
          Length = 1507

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = -1

Query: 253  FLVRIDHFSLKYLLEQRITTSPQQHWISKLMGFDFRVEFKAGKLNKAADALSRCDESSLQ 74
            F+V+ DH+SLKYLL+QR+ T PQ HW+ KL+GFDF VE+++G  N  ADALSR D     
Sbjct: 947  FIVKTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFSVEYRSGATNVVADALSRRDTEEGA 1006

Query: 73   LMAVSFPRVEILD 35
             MA+S PR +++D
Sbjct: 1007 AMAISAPRFDLID 1019


>ref|XP_002437407.1| hypothetical protein SORBIDRAFT_10g026363 [Sorghum bicolor]
            gi|241915630|gb|EER88774.1| hypothetical protein
            SORBIDRAFT_10g026363 [Sorghum bicolor]
          Length = 1609

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/94 (47%), Positives = 63/94 (67%), Gaps = 10/94 (10%)
 Frame = -1

Query: 253  FLVRIDHFSLKYLLEQRITTSPQQHWISKLMGFDFRVEFKAGKLNKAADALSRCD----- 89
            F+VR DH++LK+LL+QR++T PQ HWISKLMG+DFR+EF+ G+ N  ADALSR D     
Sbjct: 1052 FIVRTDHYALKFLLDQRLSTIPQNHWISKLMGYDFRIEFRPGRFNVVADALSRRDGDAPL 1111

Query: 88   -----ESSLQLMAVSFPRVEILDTV*QEISSSQE 2
                  +   L A+S P  ++ D + QE ++S E
Sbjct: 1112 LSTLPSAEPVLAALSTPTFQLFDELRQEFAASDE 1145


>gb|ABA92870.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 621

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 44/82 (53%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = -1

Query: 253 FLVRIDHFSLKYLLEQRITTSPQQHWISKLMGFDFRVEFKAGKLNKAADALSRCDES-SL 77
           F+VR DH+SLKYLL+QR++T PQ  W+SKLMGFDF VEF+ G+ N  ADALSR DE  + 
Sbjct: 136 FVVRTDHYSLKYLLDQRLSTIPQHRWVSKLMGFDFTVEFRPGRNNVVADALSRRDEDMAP 195

Query: 76  QLMAVSFPRVEILDTV*QEISS 11
            LMA++ P   + D + +E+++
Sbjct: 196 TLMALTGPAFSVFDDLRREVAT 217


>gb|ACE86410.1| putative retroelement protein [Sorghum bicolor]
          Length = 1029

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 40/75 (53%), Positives = 56/75 (74%)
 Frame = -1

Query: 253 FLVRIDHFSLKYLLEQRITTSPQQHWISKLMGFDFRVEFKAGKLNKAADALSRCDESSLQ 74
           FLVR DH+SLK+LL+QR++T PQ HW+SKL+ FDF VE++ G+LN   DALSR DE ++ 
Sbjct: 505 FLVRTDHYSLKFLLDQRLSTVPQHHWVSKLLRFDFAVEYRPGRLNSVTDALSRRDEDAVT 564

Query: 73  LMAVSFPRVEILDTV 29
            +A+S P   + D +
Sbjct: 565 ELALSGPSFALYDDI 579


>ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
            gi|15217201|gb|AAK92545.1|AC051624_3 Putative
            retroelement [Oryza sativa Japonica Group]
            gi|31431040|gb|AAP52878.1| retrotransposon protein,
            putative, unclassified, expressed [Oryza sativa Japonica
            Group] gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza
            sativa Japonica Group]
          Length = 1476

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = -1

Query: 253  FLVRIDHFSLKYLLEQRITTSPQQHWISKLMGFDFRVEFKAGKLNKAADALSRCDESSLQ 74
            F+VR DH+SLKYLL+QR+ T PQ HW+ KL+GFDF VE+K+G  N  ADALSR D     
Sbjct: 889  FVVRTDHYSLKYLLDQRLATIPQHHWVGKLLGFDFTVEYKSGASNVVADALSRRDTDEGA 948

Query: 73   LMAVSFPRVEILD 35
            ++A+S PR + ++
Sbjct: 949  VLALSAPRFDYIE 961


Top