BLASTX nr result

ID: Angelica22_contig00036982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036982
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    79   4e-13
emb|CBI36964.3| unnamed protein product [Vitis vinifera]               79   4e-13
gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linu...    78   7e-13
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12

>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/82 (50%), Positives = 55/82 (67%)
 Frame = -2

Query: 264 VEDTMNKYVSHGNFATELELDSCVKELRKYGQYPLALAVMEWMMNKSGIGFSPTDIAKYL 85
           V  T+N+ +  G   +++ L +C+K+LRKYG++  A+ VMEW M K  + FS  D A YL
Sbjct: 15  VSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEW-MQKRKMNFSHVDHAVYL 73

Query: 84  DLTAKVKGISAAEYYFSGLLPS 19
           DLTAK KGI+AAE YF  L PS
Sbjct: 74  DLTAKTKGIAAAENYFDNLPPS 95


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = -2

Query: 264 VEDTMNKYVSHGNFATELELDSCVKELRKYGQYPLALAVMEWMMNKSGIGFSPTDIAKYL 85
           V DT+N+++  G    + EL SC+K+LRKY Q+  AL +M+WM N+  I FS  D A  L
Sbjct: 60  VADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRK-IFFSYADYAVRL 118

Query: 84  DLTAKVKGISAAEYYFSGLLPS 19
           DL +K KG++ AE YF+ L PS
Sbjct: 119 DLLSKTKGLATAEEYFNNLSPS 140


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 39/82 (47%), Positives = 54/82 (65%)
 Frame = -2

Query: 264 VEDTMNKYVSHGNFATELELDSCVKELRKYGQYPLALAVMEWMMNKSGIGFSPTDIAKYL 85
           V DT+N+++  G    + EL SC+K+LRKY Q+  AL +M+WM N+  I FS  D A  L
Sbjct: 99  VADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRK-IFFSYADYAVRL 157

Query: 84  DLTAKVKGISAAEYYFSGLLPS 19
           DL +K KG++ AE YF+ L PS
Sbjct: 158 DLLSKTKGLATAEEYFNNLSPS 179


>gb|AFN53641.1| pentatricopeptide repeat-containing protein [Linum usitatissimum]
          Length = 516

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/82 (50%), Positives = 52/82 (63%)
 Frame = -2

Query: 264 VEDTMNKYVSHGNFATELELDSCVKELRKYGQYPLALAVMEWMMNKSGIGFSPTDIAKYL 85
           V+  +N YV  G    ++EL  CVKELRKYG++   L +MEW M K GI     D+A  L
Sbjct: 60  VDKVLNDYVMDGMSIRKVELMRCVKELRKYGRFNHGLEIMEW-MEKRGINLGHGDLAVRL 118

Query: 84  DLTAKVKGISAAEYYFSGLLPS 19
           DL  K KGI+ AE YF+GL+PS
Sbjct: 119 DLICKTKGITEAENYFNGLVPS 140


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/82 (47%), Positives = 53/82 (64%)
 Frame = -2

Query: 264 VEDTMNKYVSHGNFATELELDSCVKELRKYGQYPLALAVMEWMMNKSGIGFSPTDIAKYL 85
           V  T+N+++  GN   + EL+ C+KELRKY +Y   L +MEWM  +  I +S TD A  L
Sbjct: 25  VAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWMETRK-INYSFTDYALRL 83

Query: 84  DLTAKVKGISAAEYYFSGLLPS 19
           DL +KV G++AAE YF  L PS
Sbjct: 84  DLISKVNGVTAAEKYFYDLPPS 105


Top