BLASTX nr result

ID: Angelica22_contig00036939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036939
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34116.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi...   121   7e-26
ref|XP_002514422.1| pentatricopeptide repeat-containing protein,...   114   8e-24
ref|XP_002525881.1| pentatricopeptide repeat-containing protein,...   112   3e-23
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi...   110   9e-23

>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/101 (56%), Positives = 74/101 (73%)
 Frame = -3

Query: 305 RGCMPSILTCNYLMNRLVECRKMDMVVSLYLQLKRLGFTPNVYTYGIVIKALCRKGEMED 126
           RG +P I++CN+LMNRL+E  K+DM V++Y  LKRLG  PN YTYGI IKALCRKG  E+
Sbjct: 186 RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 125 ATYVLYEMDQAQVEPDVFIYTSYIDGLCSHGTSVLGYDMLK 3
           A  V  EM++A V P+    ++YI+GLCSH  S LGY+ L+
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALR 286


>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/101 (56%), Positives = 74/101 (73%)
 Frame = -3

Query: 305 RGCMPSILTCNYLMNRLVECRKMDMVVSLYLQLKRLGFTPNVYTYGIVIKALCRKGEMED 126
           RG +P I++CN+LMNRL+E  K+DM V++Y  LKRLG  PN YTYGI IKALCRKG  E+
Sbjct: 186 RGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEE 245

Query: 125 ATYVLYEMDQAQVEPDVFIYTSYIDGLCSHGTSVLGYDMLK 3
           A  V  EM++A V P+    ++YI+GLCSH  S LGY+ L+
Sbjct: 246 AVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALR 286


>ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546418|gb|EEF47918.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 809

 Score =  114 bits (285), Expect = 8e-24
 Identities = 52/100 (52%), Positives = 71/100 (71%)
 Frame = -3

Query: 302 GCMPSILTCNYLMNRLVECRKMDMVVSLYLQLKRLGFTPNVYTYGIVIKALCRKGEMEDA 123
           G  P IL+CN+LMNRLVE RK+DM +++Y QLK  G  PN YTY I IK  CRKG + +A
Sbjct: 179 GFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNLAEA 238

Query: 122 TYVLYEMDQAQVEPDVFIYTSYIDGLCSHGTSVLGYDMLK 3
             V  +M+++ V P+ F YT++I+GLC HG S LG+ +L+
Sbjct: 239 IDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQ 278


>ref|XP_002525881.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534795|gb|EEF36485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 913

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/101 (51%), Positives = 73/101 (72%)
 Frame = -3

Query: 305 RGCMPSILTCNYLMNRLVECRKMDMVVSLYLQLKRLGFTPNVYTYGIVIKALCRKGEMED 126
           R  +P I  CN+LMN L++  K+DM +++Y QLKRLG +PN YTY IVIKALC  G +E+
Sbjct: 192 RRFVPHIFICNFLMNSLIKNSKLDMALAVYKQLKRLGLSPNDYTYAIVIKALCINGSLEE 251

Query: 125 ATYVLYEMDQAQVEPDVFIYTSYIDGLCSHGTSVLGYDMLK 3
           A YV+ EM+++ + P  F YT+YI+GLC +  S LGY +L+
Sbjct: 252 AMYVIKEMEESGITPTGFAYTAYIEGLCVNEMSDLGYQVLQ 292


>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial-like [Glycine max]
          Length = 819

 Score =  110 bits (276), Expect = 9e-23
 Identities = 50/101 (49%), Positives = 73/101 (72%)
 Frame = -3

Query: 305 RGCMPSILTCNYLMNRLVECRKMDMVVSLYLQLKRLGFTPNVYTYGIVIKALCRKGEMED 126
           RG +P +LTCN+L NRLVE  ++D  +++Y QLKR GF PN YTY IVIKALC+KG+++ 
Sbjct: 189 RGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLKQ 248

Query: 125 ATYVLYEMDQAQVEPDVFIYTSYIDGLCSHGTSVLGYDMLK 3
              V  EM++  V P  + + +YI+GLC++  S LGY++L+
Sbjct: 249 PLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQ 289


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