BLASTX nr result
ID: Angelica22_contig00036780
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00036780
(332 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27
ref|XP_002530609.1| pentatricopeptide repeat-containing protein,... 120 9e-26
ref|XP_002875993.1| pentatricopeptide repeat-containing protein ... 108 5e-22
ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|NP_190543.1| pentatricopeptide repeat-containing protein [Ar... 101 7e-20
>ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 126 bits (316), Expect = 2e-27
Identities = 63/106 (59%), Positives = 77/106 (72%)
Frame = +3
Query: 12 YENCTSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYL 191
+E CT V NAAMTMYS+CG+L H+VF ++EKD +SWN II YAQG+ AILA+L
Sbjct: 315 FEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFL 374
Query: 192 QMQSEGIRPDEFTVGSLLASTEMLVSVEMILAVVFKYGLFSNTQVS 329
QMQ GI PDEFT+GSLLAS+E L V+M A+V K GL S +VS
Sbjct: 375 QMQRAGIEPDEFTIGSLLASSESLEIVKMFQALVSKNGLNSKIEVS 420
Score = 62.8 bits (151), Expect = 3e-08
Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 TSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYLQMQ- 200
TS+ NA +TMY+ CGDLD + +F M +D VSWN +I+ YAQ A+ + MQ
Sbjct: 518 TSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAMQD 577
Query: 201 SEGIRPDEFTVGSLLAS 251
S G++PD+ T ++L++
Sbjct: 578 SGGVKPDQATFTAVLSA 594
>ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529857|gb|EEF31789.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 684
Score = 120 bits (302), Expect = 9e-26
Identities = 60/106 (56%), Positives = 77/106 (72%)
Frame = +3
Query: 12 YENCTSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYL 191
+E TS+ NA +TMYS+C DL A VF+ ++ KD VSWNT+I+ Y QG+ AILAYL
Sbjct: 328 FEASTSLSNATITMYSSCKDLHAARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYL 387
Query: 192 QMQSEGIRPDEFTVGSLLASTEMLVSVEMILAVVFKYGLFSNTQVS 329
+M+ G PDEFT GSLLAS+E+L +VEMI A+VF+ L SN QVS
Sbjct: 388 EMRRTGTEPDEFTFGSLLASSELLETVEMIHALVFRNSLISNIQVS 433
Score = 55.5 bits (132), Expect = 5e-06
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +3
Query: 27 SVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYLQMQ-S 203
S+ N +T Y+ CG +D + VF + +KDTVSWN +I+ YAQ AI + MQ S
Sbjct: 532 SLGNGLITFYAKCGLIDWSSRVFTALAKKDTVSWNALISAYAQHGKGNEAIYQFEAMQHS 591
Query: 204 EGIRPDEFTVGSLLAS 251
++PD+ T +L++
Sbjct: 592 SEVQPDDATFKIVLSA 607
>ref|XP_002875993.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321831|gb|EFH52252.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 731
Score = 108 bits (270), Expect = 5e-22
Identities = 52/106 (49%), Positives = 74/106 (69%)
Frame = +3
Query: 12 YENCTSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYL 191
YE T V N+ MTMYS+ D AH VF+ ++EKD ++WNT+I+GY Q +L +A+L Y
Sbjct: 313 YEEYTLVSNSTMTMYSSFEDFGAAHKVFESLEEKDLITWNTMISGYNQANLGQSALLLYK 372
Query: 192 QMQSEGIRPDEFTVGSLLASTEMLVSVEMILAVVFKYGLFSNTQVS 329
+M G++PDEFT GSLLAS+ L ++EM+ A V K+GL S ++S
Sbjct: 373 RMHGIGVKPDEFTFGSLLASSLDLDALEMVQACVIKFGLSSKIEIS 418
Score = 67.8 bits (164), Expect = 9e-10
Identities = 33/77 (42%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 TSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYLQMQS 203
T + NA + MYS CG L + VF +M +KDTVSWN++I+ YA+ +A+L Y MQ
Sbjct: 518 TLIGNAFINMYSQCGTLQKSLAVFHQMSDKDTVSWNSLISAYARHGKGESAVLTYKTMQD 577
Query: 204 EG-IRPDEFTVGSLLAS 251
EG + PD T+ ++L++
Sbjct: 578 EGKVDPDAATLSAVLSA 594
>ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 107 bits (267), Expect = 1e-21
Identities = 51/101 (50%), Positives = 71/101 (70%)
Frame = +3
Query: 6 IDYENCTSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILA 185
+ +E+ T V N+ +TMY++CG+ A+ VFQ + EKD +SWN II+ Y QG+ +A+LA
Sbjct: 320 LGFESFTLVGNSTITMYTSCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLA 379
Query: 186 YLQMQSEGIRPDEFTVGSLLASTEMLVSVEMILAVVFKYGL 308
+LQMQ GI PDEFT GSLL +E + VEM+ A V+K GL
Sbjct: 380 FLQMQRTGIGPDEFTFGSLLGVSEFIEIVEMVHAYVYKNGL 420
>ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g49740 gi|6723419|emb|CAB66912.1| putative protein
[Arabidopsis thaliana] gi|332645063|gb|AEE78584.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 737
Score = 101 bits (251), Expect = 7e-20
Identities = 50/106 (47%), Positives = 70/106 (66%)
Frame = +3
Query: 12 YENCTSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYL 191
YE T V NA MTMYS+ D AH VF+ ++EKD V+WNT+I+ Y Q L +A+ Y
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 192 QMQSEGIRPDEFTVGSLLASTEMLVSVEMILAVVFKYGLFSNTQVS 329
+M G++PDEFT GSLLA++ L +EM+ A + K+GL S ++S
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS 424
Score = 59.7 bits (143), Expect = 2e-07
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 24 TSVRNAAMTMYSTCGDLDTAHLVFQEMQEKDTVSWNTIITGYAQGHLAGAAILAYLQMQS 203
T + NA + MYS CG + + VF +M EKD VSWN++I+ Y++ A+ Y MQ
Sbjct: 524 TLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQD 583
Query: 204 EG-IRPDEFTVGSLLAS 251
EG + PD T ++L++
Sbjct: 584 EGKVIPDAATFSAVLSA 600