BLASTX nr result

ID: Angelica22_contig00036733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036733
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]    73   6e-12
emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]    72   6e-11
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    69   5e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    68   7e-10
emb|CAN69747.1| hypothetical protein VITISV_016320 [Vitis vinifera]    68   7e-10

>emb|CAN73102.1| hypothetical protein VITISV_042891 [Vitis vinifera]
          Length = 1493

 Score = 72.8 bits (177), Expect(2) = 6e-12
 Identities = 34/70 (48%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +2

Query: 209 VFHARLGHMSISKFQHL-TGFASKQSLSDFDCEACVLAKHHKLSFPDSHSLASHCFELLH 385
           ++H R+GH S    +HL     S +++ DF CE C LAKHH+ SFP S    S  F L+H
Sbjct: 551 LWHKRMGHPSFQYLKHLFPSLCSNKTILDFQCEVCELAKHHRTSFPKSKYKPSIPFTLIH 610

Query: 386 IDLWGPYRTP 415
            DLWGP RTP
Sbjct: 611 SDLWGPSRTP 620



 Score = 22.3 bits (46), Expect(2) = 6e-12
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +3

Query: 6   KNNLVANFQPSSCFFHDPSTHQIKAVGIRHGGLY 107
           K+N  A F  S C F D S+ +         GLY
Sbjct: 489 KSNCSAKFLSSHCVFQDLSSGKTIGSAKEREGLY 522


>emb|CAN72408.1| hypothetical protein VITISV_038204 [Vitis vinifera]
          Length = 1721

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/68 (50%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +2

Query: 215 HARLGHMSISKFQHL-TGFASKQSLSDFDCEACVLAKHHKLSFPDSHSLASHCFELLHID 391
           H ++GH S    +HL     S ++L DF CE C LAKHH+ SFP S    S  F L+H D
Sbjct: 292 HKKMGHPSFQYLKHLFPSLCSNKTLLDFQCEVCELAKHHRASFPKSKYKPSIPFTLIHSD 351

Query: 392 LWGPYRTP 415
           LWGP RTP
Sbjct: 352 LWGPSRTP 359


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 125 TSPHNDKTDFVSSACSVSDTQKINISFD--VFHARLGHMSISKFQHLTGFA-SKQSLSDF 295
           T    D   +++ A + +   K++I+ D  ++H RLGH S S    L  F+ S  S+S  
Sbjct: 483 TGEERDGVYYLTDAATTT-VHKVDITTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSR 541

Query: 296 DCEACVLAKHHKLSFPDSHSLASHCFELLHIDLWGPYRTP 415
            C+ C  AK  +  FPDS + ++ CF L+H D+WGPYR P
Sbjct: 542 SCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVP 581


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
 Frame = +2

Query: 125 TSPHNDKTDFVSSACSVSDTQKINISFD--VFHARLGHMSISKFQHLTGFA-SKQSLSDF 295
           T    D   +++ A + +   K++++ D  ++H RLGH S S    L  F+ S  S+S  
Sbjct: 483 TGEERDGVYYLTDAATTT-VHKVDVTTDHALWHQRLGHPSFSVLSSLPLFSGSSCSVSSR 541

Query: 296 DCEACVLAKHHKLSFPDSHSLASHCFELLHIDLWGPYRTP 415
            C+ C  AK  +  FPDS + ++ CF L+H D+WGPYR P
Sbjct: 542 SCDVCFRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVP 581


>emb|CAN69747.1| hypothetical protein VITISV_016320 [Vitis vinifera]
          Length = 634

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = +2

Query: 182 TQKINISFDV---FHARLGHMSISKFQHLTGFASKQSLSDFDCEACVLAKHHKLSFPDS- 349
           T  + IS DV    H+RLGH S+SKFQ +    S  SLS   CE+C L KH ++SFP   
Sbjct: 255 THAVCISTDVPFLIHSRLGHPSLSKFQKMVPCFS--SLSSLACESCQLGKHTRVSFPKXL 312

Query: 350 HSLASHCFELLHIDLWGPYRTPY 418
           ++ A   FEL+H D+WGP RT +
Sbjct: 313 NNQAKSHFELVHTDVWGPCRTAF 335


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