BLASTX nr result

ID: Angelica22_contig00036717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036717
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabac...    92   4e-17
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]    88   6e-16
emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]    88   8e-16
emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]    88   8e-16
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc...    87   2e-15

>ref|YP_173356.1| hypothetical protein NitaMp008 [Nicotiana tabacum]
           gi|56806518|dbj|BAD83419.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 215

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/64 (59%), Positives = 53/64 (82%), Gaps = 1/64 (1%)
 Frame = -3

Query: 211 GRLCVPR-SAIREELLVEAHNSPFYVHPGSTKMYRDMKDQFWWSGMKRDIADYVSKCMTC 35
           GR+CVP+ S +  ++L EAH+SPF++HPGSTKMYR ++  +WW GMKRD+A+YV+KC+ C
Sbjct: 18  GRVCVPQDSDLCHDILEEAHSSPFFLHPGSTKMYRTIRPHYWWKGMKRDVAEYVAKCLVC 77

Query: 34  *LVK 23
            LVK
Sbjct: 78  QLVK 81


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -3

Query: 211  GRLCVPRSA-IREELLVEAHNSPFYVHPGSTKMYRDMKDQFWWSGMKRDIADYVSKCMTC 35
            GRLCVP+   +R ELL +AH + + +HPG+TKMY+D+K QFWWSGMKRDIA +V  C  C
Sbjct: 1088 GRLCVPKDVELRNELLADAHRAKYTIHPGNTKMYQDLKRQFWWSGMKRDIAQFVXNCQIC 1147

Query: 34   *LVK 23
              VK
Sbjct: 1148 QQVK 1151


>emb|CAN59996.1| hypothetical protein VITISV_020887 [Vitis vinifera]
          Length = 701

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -3

Query: 223 VWLLGRLCVPRSA-IREELLVEAHNSPFYVHPGSTKMYRDMKDQFWWSGMKRDIADYVSK 47
           VW  GRLCVP+   +R ELL +AH + + +HPG+TKMY+D+K QFW +GMKRDIA +V+ 
Sbjct: 602 VWFKGRLCVPKDVGLRNELLADAHKAKYTIHPGNTKMYQDLKRQFWCNGMKRDIAQFVAN 661

Query: 46  CMTC*LVK 23
           C  C  VK
Sbjct: 662 CQICQQVK 669


>emb|CAN59997.1| hypothetical protein VITISV_020888 [Vitis vinifera]
          Length = 893

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -3

Query: 223 VWLLGRLCVPRSA-IREELLVEAHNSPFYVHPGSTKMYRDMKDQFWWSGMKRDIADYVSK 47
           VW  GRLCVP+   +R ELL +AH + + +HPG+TKMY+D+K QFW +GMKRDIA +V+ 
Sbjct: 486 VWFKGRLCVPKDVGLRNELLADAHKAKYTIHPGNTKMYQDLKRQFWCNGMKRDIAQFVAN 545

Query: 46  CMTC*LVK 23
           C  C  VK
Sbjct: 546 CQICQQVK 553


>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1122

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 37/68 (54%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
 Frame = -3

Query: 223 VWLLGRLCVP-RSAIREELLVEAHNSPFYVHPGSTKMYRDMKDQFWWSGMKRDIADYVSK 47
           VW   R+CVP R  +++ +L EAH S + +HPGSTKMY+D+K+ FWW+GMKRD+A+YV+ 
Sbjct: 791 VWFGSRICVPARKELKDLILREAHESAYSIHPGSTKMYQDIKEYFWWAGMKRDVAEYVAL 850

Query: 46  CMTC*LVK 23
           C  C  VK
Sbjct: 851 CDICQRVK 858


Top