BLASTX nr result

ID: Angelica22_contig00036630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036630
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containi...    71   8e-11
ref|XP_002877745.1| pentatricopeptide repeat-containing protein ...    71   8e-11
ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containi...    68   7e-10
ref|XP_003611834.1| Pentatricopeptide repeat-containing protein ...    68   9e-10

>ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 690

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/92 (47%), Positives = 58/92 (63%)
 Frame = -2

Query: 277 SYSALIAAYSRSPNNAHLAFNLLSQLHATDCFRLYSSTFTGLLQASLCVGDYVLASALHC 98
           S++ALIAAYSRS  +A LAFNLLSQ+   +  +  S T T LLQA+    D   +S +H 
Sbjct: 105 SFNALIAAYSRSHGHAPLAFNLLSQMEL-EFLKPNSFTITSLLQAASFTEDPFWSSLIHA 163

Query: 97  QGVKFGFLDDKYVQTSLLSLYLNRKDMECAKK 2
           Q VK GF+ D  VQT+L+  Y +  D+E A K
Sbjct: 164 QVVKCGFVHDVRVQTALIGTYSHCLDLESAGK 195


>ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 696

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/92 (47%), Positives = 58/92 (63%)
 Frame = -2

Query: 277 SYSALIAAYSRSPNNAHLAFNLLSQLHATDCFRLYSSTFTGLLQASLCVGDYVLASALHC 98
           S++ALIAAYSRS  +A LAFNLLSQ+   +  +  S T T LLQA+    D   +S +H 
Sbjct: 75  SFNALIAAYSRSHGHAPLAFNLLSQMEL-EFLKPNSFTITSLLQAASFTEDPFWSSLIHA 133

Query: 97  QGVKFGFLDDKYVQTSLLSLYLNRKDMECAKK 2
           Q VK GF+ D  VQT+L+  Y +  D+E A K
Sbjct: 134 QVVKCGFVHDVRVQTALIGTYSHCLDLESAGK 165


>ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323583|gb|EFH54004.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 764

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/92 (41%), Positives = 62/92 (67%)
 Frame = -2

Query: 277 SYSALIAAYSRSPNNAHLAFNLLSQLHATDCFRLYSSTFTGLLQASLCVGDYVLASALHC 98
           SY+AL +AYSR+ + A  AF+L++Q+ A++  +  SSTFT L+Q    + D ++ S LH 
Sbjct: 78  SYNALYSAYSRNLDYASYAFSLINQM-ASESLKPNSSTFTSLVQVCTVLEDVLMGSLLHS 136

Query: 97  QGVKFGFLDDKYVQTSLLSLYLNRKDMECAKK 2
           Q +K G+ D+  VQTS+L +Y +  D+E A++
Sbjct: 137 QIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 168


>ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
 Frame = -2

Query: 277 SYSALIAAYSR-SPNNAHLAFNLLSQLHATDCFRLYSSTFTGLLQASLCVGDYVLASALH 101
           SY+AL+AAYSR SPN+A  A  L +Q+  T+  R  S+TFT LLQAS  +  +   S+LH
Sbjct: 81  SYNALLAAYSRASPNHAISALELYTQM-VTNGLRPSSTTFTSLLQASSLLEHWWFGSSLH 139

Query: 100 CQGVKFGFLDDKYVQTSLLSLYLNRKDMECAK 5
            +G K G L+D  +QTSLL++Y N  D+  A+
Sbjct: 140 AKGFKLG-LNDICLQTSLLNMYSNCGDLSSAE 170


>ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513169|gb|AES94792.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 985

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
 Frame = -2

Query: 277 SYSALIAAYSR-SPNNAHLAFNLLSQLHATDCFRLYSSTFTGLLQASLCVGDYVLASALH 101
           SY+AL+AAYSR S  +   AFNL +Q+      R  + T T LLQA+   GD ++   LH
Sbjct: 350 SYNALLAAYSRVSEQHCVYAFNLYTQMENMG-LRPSNMTITSLLQAASLHGDLLIGLLLH 408

Query: 100 CQGVKFGFLDDKYVQTSLLSLYLNRKDMECAK 5
            + +KFGFL+D  VQTSLL++Y +  D+  A+
Sbjct: 409 AKSLKFGFLNDICVQTSLLNMYSSCMDLSSAE 440


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