BLASTX nr result

ID: Angelica22_contig00036614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036614
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97563.1| retrotransposon protein, putative, unclassified [...   140   1e-31
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   137   1e-30
emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]   131   5e-29
emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]   130   9e-29
gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japo...   129   3e-28

>gb|ABA97563.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 839

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/124 (56%), Positives = 92/124 (74%)
 Frame = -1

Query: 378 LEKGMIPANVNETNVVLXXXXXXXXXXXXNVMKDLRPIALCNVLYKIMVKVLANRLKKLL 199
           L  G IP   NET +VL             ++KDLRPI++CNVLYKI+ KVLANRLKK+L
Sbjct: 353 LNGGQIPQEWNETTIVLIPKVKTFE-----LIKDLRPISVCNVLYKIVSKVLANRLKKIL 407

Query: 198 PGMIIENQSAFVPGRSITDNVLVAFEIIHHMKRKHSGVDGDVALKLDISKAYDRVSWGYL 19
           P +I ++QSAF PGR I+DN+LVA+E+ H+M++K +G  G  ALKLD+SKAYDRV WG+L
Sbjct: 408 PEVISQSQSAFFPGRLISDNILVAYELTHYMRQKRNGETGYAALKLDMSKAYDRVEWGFL 467

Query: 18  RDVM 7
           +D+M
Sbjct: 468 KDMM 471


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/125 (56%), Positives = 89/125 (71%)
 Frame = -1

Query: 378 LEKGMIPANVNETNVVLXXXXXXXXXXXXNVMKDLRPIALCNVLYKIMVKVLANRLKKLL 199
           L  G IP   N+T +VL             ++KDLRPI+LCNVLYK++ KVLANRLKK+L
Sbjct: 56  LNGGPIPEGWNDTIIVLIPKTNTPQ-----MLKDLRPISLCNVLYKLISKVLANRLKKIL 110

Query: 198 PGMIIENQSAFVPGRSITDNVLVAFEIIHHMKRKHSGVDGDVALKLDISKAYDRVSWGYL 19
           P +I  +QSAFVPGR ITDNVL+A+EI+HH+K    G  G  A+KLD+SKAYDRV W +L
Sbjct: 111 PNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFL 170

Query: 18  RDVMR 4
            ++MR
Sbjct: 171 ENMMR 175


>emb|CAN77449.1| hypothetical protein VITISV_016970 [Vitis vinifera]
          Length = 517

 Score =  131 bits (330), Expect = 5e-29
 Identities = 64/93 (68%), Positives = 78/93 (83%)
 Frame = -1

Query: 285 MKDLRPIALCNVLYKIMVKVLANRLKKLLPGMIIENQSAFVPGRSITDNVLVAFEIIHHM 106
           M+DLRPIALCNVLYKI+ KVLANRLK   P +I E+Q AFVPGR+IT+NV+VAFE+IH+M
Sbjct: 1   MRDLRPIALCNVLYKIIAKVLANRLKVFFPVLIDESQLAFVPGRAITNNVVVAFELIHYM 60

Query: 105 KRKHSGVDGDVALKLDISKAYDRVSWGYLRDVM 7
           KRK  G   DVALK+DI+KAYDR+ W YL+ +M
Sbjct: 61  KRKTHGKVRDVALKIDINKAYDRIRWDYLKVIM 93


>emb|CAN71438.1| hypothetical protein VITISV_011330 [Vitis vinifera]
          Length = 1484

 Score =  130 bits (328), Expect = 9e-29
 Identities = 71/124 (57%), Positives = 87/124 (70%)
 Frame = -1

Query: 378 LEKGMIPANVNETNVVLXXXXXXXXXXXXNVMKDLRPIALCNVLYKIMVKVLANRLKKLL 199
           L     PA++NET +VL              M+DLRPIALCNVLYKI+ KVLA RLK L 
Sbjct: 100 LNNNEFPASLNETIIVLIPKNDNPVS-----MRDLRPIALCNVLYKIIAKVLAXRLKVL- 153

Query: 198 PGMIIENQSAFVPGRSITDNVLVAFEIIHHMKRKHSGVDGDVALKLDISKAYDRVSWGYL 19
              I E+QS FVP ++IT+NV+VAFE+IH+MKRK  G  GDVALK+DISKAYDR+ W YL
Sbjct: 154 ---INESQSTFVPAKAITBNVVVAFELIHYMKRKTHGKVGDVALKIDISKAYDRIRWDYL 210

Query: 18  RDVM 7
           + +M
Sbjct: 211 KAIM 214


>gb|AAM93462.1| putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 566

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/120 (53%), Positives = 86/120 (71%)
 Frame = -1

Query: 363 IPANVNETNVVLXXXXXXXXXXXXNVMKDLRPIALCNVLYKIMVKVLANRLKKLLPGMII 184
           +P   N+TN+VL             V+K+LRP +LCNV+YKI+ KVLANRLK +LP +I+
Sbjct: 1   MPVGWNDTNIVLIPKVKSPS-----VLKELRPSSLCNVVYKIISKVLANRLKSILPEIIL 55

Query: 183 ENQSAFVPGRSITDNVLVAFEIIHHMKRKHSGVDGDVALKLDISKAYDRVSWGYLRDVMR 4
           + QSAFVPGR ITDNVL+A+E  H ++ K +G DG  A+KLD+SKAYDRV W +L  ++R
Sbjct: 56  DTQSAFVPGRLITDNVLIAYEATHFLQNKRNGKDGYAAIKLDMSKAYDRVEWPFLLHMLR 115


Top