BLASTX nr result

ID: Angelica22_contig00036520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036520
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [C...   175   5e-51
ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medica...   138   1e-39
ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medica...    97   4e-28
ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago ...   121   7e-26
emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vu...   100   2e-20

>ref|XP_004149312.1| PREDICTED: (-)-germacrene D synthase-like [Cucumis sativus]
          Length = 828

 Score =  175 bits (444), Expect(2) = 5e-51
 Identities = 82/92 (89%), Positives = 86/92 (93%)
 Frame = -2

Query: 321 LWGGGGPLDIVLSGSGRLVHGPLDGWCKARNWNTLIPLVPVLRFRACPSVWSVLHTVGQQ 142
           +WGGGGPLDIVLSGSGRLVHGPLDG CKARN NTLIPLVPVLRFRACPSVWSVLHTVGQ+
Sbjct: 335 VWGGGGPLDIVLSGSGRLVHGPLDGRCKARNLNTLIPLVPVLRFRACPSVWSVLHTVGQR 394

Query: 141 SLHLFTNYDGSPGPLSSSLFCSLVGGRTPTKG 46
           SLHLFTNY+GSPGPLSSSLFCSLVG   P +G
Sbjct: 395 SLHLFTNYEGSPGPLSSSLFCSLVGSGPPQRG 426



 Score = 50.8 bits (120), Expect(2) = 5e-51
 Identities = 20/22 (90%), Positives = 22/22 (100%)
 Frame = -3

Query: 68  GAGPPQRGRESTEHLSHWREYR 3
           G+GPPQRGRESTEHLSHWRE+R
Sbjct: 419 GSGPPQRGRESTEHLSHWREFR 440


>ref|XP_003588311.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477359|gb|AES58562.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 548

 Score =  138 bits (348), Expect(2) = 1e-39
 Identities = 61/65 (93%), Positives = 64/65 (98%)
 Frame = +2

Query: 122 LVNKCKLCCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHQPSNGPWTKRPLPERTMSR 301
           ++NKCKL CPTVWSTDHTEGQALKRRTGTSGINVFQFLALH+PSNGPWTKRPLPERTMSR
Sbjct: 415 VINKCKLRCPTVWSTDHTEGQALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPERTMSR 474

Query: 302 GPPPP 316
           GPPPP
Sbjct: 475 GPPPP 479



 Score = 50.1 bits (118), Expect(2) = 1e-39
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +1

Query: 1   GRYSRQWLRCSVDSLPLCGGPAP 69
           GR SRQWLRCSVDSLPLCGGP P
Sbjct: 390 GRNSRQWLRCSVDSLPLCGGPDP 412


>ref|XP_003588331.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477379|gb|AES58582.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 569

 Score = 96.7 bits (239), Expect(2) = 4e-28
 Identities = 43/45 (95%), Positives = 45/45 (100%)
 Frame = +2

Query: 182 QALKRRTGTSGINVFQFLALHQPSNGPWTKRPLPERTMSRGPPPP 316
           +ALKRRTGTSGINVFQFLALH+PSNGPWTKRPLPERTMSRGPPPP
Sbjct: 456 RALKRRTGTSGINVFQFLALHRPSNGPWTKRPLPERTMSRGPPPP 500



 Score = 53.1 bits (126), Expect(2) = 4e-28
 Identities = 24/33 (72%), Positives = 25/33 (75%)
 Frame = +1

Query: 1   GRYSRQWLRCSVDSLPLCGGPAPYE*AEKGGGK 99
           GR SRQWLRCSVDSLPLCGGP P   + KG  K
Sbjct: 411 GRNSRQWLRCSVDSLPLCGGPDPLRVSRKGRRK 443


>ref|XP_003588406.1| hypothetical protein MTR_1g006900 [Medicago truncatula]
           gi|355477454|gb|AES58657.1| hypothetical protein
           MTR_1g006900 [Medicago truncatula]
          Length = 160

 Score =  121 bits (303), Expect = 7e-26
 Identities = 62/92 (67%), Positives = 63/92 (68%)
 Frame = +2

Query: 41  PSPFVGVRPPTSEQKXXXXXXXXXXS*LVNKCKLCCPTVWSTDHTEGQALKRRTGTSGIN 220
           P P  G  P TSEQK                       VWSTDHTEGQALKRRTGTSGIN
Sbjct: 16  PPPLWGSGPLTSEQKREEERGP----------------VWSTDHTEGQALKRRTGTSGIN 59

Query: 221 VFQFLALHQPSNGPWTKRPLPERTMSRGPPPP 316
           VFQFLALH+PSNGPWTKRPLPERTMSRGPPPP
Sbjct: 60  VFQFLALHRPSNGPWTKRPLPERTMSRGPPPP 91


>emb|CAA39309.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 90

 Score =  100 bits (250), Expect(2) = 2e-20
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 192 SEGRERAESMCSNFWPCTNHPMDHGLNGHCLKGLCPGDRRPP 317
           SEGRERAESMCSNFWPCT+HPMDHGLNGHCLKGLCPGDRRPP
Sbjct: 1   SEGRERAESMCSNFWPCTDHPMDHGLNGHCLKGLCPGDRRPP 42



 Score = 22.7 bits (47), Expect(2) = 2e-20
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 311 PPHKVHLA 334
           PPHKVHLA
Sbjct: 41  PPHKVHLA 48


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