BLASTX nr result

ID: Angelica22_contig00036370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036370
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32639.3| unnamed protein product [Vitis vinifera]              118   4e-25
ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containi...   118   4e-25
ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
gb|ADQ43215.1| unknown [Eutrema parvulum]                             102   4e-20

>emb|CBI32639.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = -3

Query: 310 VVFSEFSLCTVVKACTLLSAHKQGKQVHALVIVMGRDLVVLGTALIDFYSRVGYIGEAIK 131
           V  SEF+LC+++KACTLL A +QGKQVHALV+VMGRDLVVLGTALIDFY+ V  IGEA++
Sbjct: 98  VWLSEFTLCSLLKACTLLKAFQQGKQVHALVVVMGRDLVVLGTALIDFYTNVECIGEAME 157

Query: 130 IFRGVNGRKDDIMCNSMISGC 68
           IF  +N +KDD+M NS+ISGC
Sbjct: 158 IFHNLNWKKDDVMRNSLISGC 178


>ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 498

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = -3

Query: 310 VVFSEFSLCTVVKACTLLSAHKQGKQVHALVIVMGRDLVVLGTALIDFYSRVGYIGEAIK 131
           V  SEF+LC+++KACTLL A +QGKQVHALV+VMGRDLVVLGTALIDFY+ V  IGEA++
Sbjct: 137 VWLSEFTLCSLLKACTLLKAFQQGKQVHALVVVMGRDLVVLGTALIDFYTNVECIGEAME 196

Query: 130 IFRGVNGRKDDIMCNSMISGC 68
           IF  +N +KDD+M NS+ISGC
Sbjct: 197 IFHNLNWKKDDVMRNSLISGC 217


>ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|222853155|gb|EEE90702.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/81 (65%), Positives = 68/81 (83%)
 Frame = -3

Query: 310 VVFSEFSLCTVVKACTLLSAHKQGKQVHALVIVMGRDLVVLGTALIDFYSRVGYIGEAIK 131
           V  +EF+LC+V+KAC  + A +QGKQVH LVIVMGRDLVVLGTALIDFYS VGYI EA+K
Sbjct: 189 VEITEFTLCSVLKACAFIKAFRQGKQVHGLVIVMGRDLVVLGTALIDFYSNVGYISEAMK 248

Query: 130 IFRGVNGRKDDIMCNSMISGC 68
           +F  ++ RKD+++ NS+I+GC
Sbjct: 249 VFSCLSCRKDEVLRNSLIAGC 269



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/75 (38%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = -3

Query: 295 FSLCTVVKACTLLSAHKQGKQVHALVIVMGRDL-VVLGTALIDFYSRVGYIGEAIKIFRG 119
           ++   V++AC+ L   K G+QVHAL+I  G DL  +  TA++D YS+ G +GE++K+F  
Sbjct: 93  YTFTPVLRACSALPDTKCGRQVHALMIKTGTDLGTITKTAVMDMYSKYGCLGESVKVFEE 152

Query: 118 VNGRKDDIMCNSMIS 74
           +  R D +  N+++S
Sbjct: 153 MEFR-DVVTWNALVS 166


>ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Cucumis sativus]
           gi|449529896|ref|XP_004171934.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Cucumis sativus]
          Length = 544

 Score =  110 bits (274), Expect = 2e-22
 Identities = 50/81 (61%), Positives = 66/81 (81%)
 Frame = -3

Query: 310 VVFSEFSLCTVVKACTLLSAHKQGKQVHALVIVMGRDLVVLGTALIDFYSRVGYIGEAIK 131
           V FSEF+LC+V+KAC  L  ++ GKQVH +V+VM RD++VLGTAL+DFYS VG I EA+K
Sbjct: 189 VEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISEAVK 248

Query: 130 IFRGVNGRKDDIMCNSMISGC 68
           ++  +N RKDDI+ NS+ISGC
Sbjct: 249 VYTSLNCRKDDIILNSLISGC 269


>gb|ADQ43215.1| unknown [Eutrema parvulum]
          Length = 527

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/81 (59%), Positives = 62/81 (76%)
 Frame = -3

Query: 310 VVFSEFSLCTVVKACTLLSAHKQGKQVHALVIVMGRDLVVLGTALIDFYSRVGYIGEAIK 131
           V  SEF+LC+VVK C  L   +QGKQVHA+V+V GRDLVVLGTA+I FYS VG + EA+K
Sbjct: 176 VEISEFTLCSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAIISFYSSVGLVTEAMK 235

Query: 130 IFRGVNGRKDDIMCNSMISGC 68
           ++  +N   D++M NS+ISGC
Sbjct: 236 VYISLNVHTDEVMLNSLISGC 256


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