BLASTX nr result

ID: Angelica22_contig00036315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036315
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [...   329   2e-88
emb|CBI15412.3| unnamed protein product [Vitis vinifera]              327   8e-88
ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-...   323   1e-86
ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|2...   320   1e-85
ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicu...   318   5e-85

>ref|XP_002511977.1| DNA mismatch repair protein MSH2, putative [Ricinus communis]
           gi|223549157|gb|EEF50646.1| DNA mismatch repair protein
           MSH2, putative [Ricinus communis]
          Length = 936

 Score =  329 bits (844), Expect = 2e-88
 Identities = 156/188 (82%), Positives = 174/188 (92%)
 Frame = -3

Query: 564 FLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTTTALRQLGNGANSLSSVSV 385
           FLSF+KTLP+D RAVR FDRRDYYTSHGENATFIAKTYY TTTALRQLG+G + LSSVS+
Sbjct: 20  FLSFFKTLPHDPRAVRVFDRRDYYTSHGENATFIAKTYYHTTTALRQLGSGPDGLSSVSI 79

Query: 384 SKNMFEMIVRDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDILFANNDMQDSPV 205
           SKNMFE I RDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFED+LFANN+MQDSP 
Sbjct: 80  SKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDVLFANNEMQDSPA 139

Query: 204 IVALVPSFKENGCIVGLGYIDLTKRVLGLTEFLDDSHFTNLESALVALGCKECLLPVDST 25
           + A++P+F+ENGC +GLGY+DLTKR+LGL EFLDDSHFTNLESALVALGCKECLLP++S 
Sbjct: 140 VAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDDSHFTNLESALVALGCKECLLPIESG 199

Query: 24  KSSESRSL 1
           KS E R+L
Sbjct: 200 KSIECRTL 207


>emb|CBI15412.3| unnamed protein product [Vitis vinifera]
          Length = 945

 Score =  327 bits (838), Expect = 8e-88
 Identities = 157/188 (83%), Positives = 176/188 (93%)
 Frame = -3

Query: 564 FLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTTTALRQLGNGANSLSSVSV 385
           FLSF+KTLP D RAVRFFDRRDYYT+HGENATFIAKTYY TTTALRQLG+G++ +SSVSV
Sbjct: 24  FLSFFKTLPRDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTALRQLGSGSDGISSVSV 83

Query: 384 SKNMFEMIVRDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDILFANNDMQDSPV 205
           SKNMFE I R+LLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFED+LFANN+MQDSPV
Sbjct: 84  SKNMFETIARNLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDVLFANNEMQDSPV 143

Query: 204 IVALVPSFKENGCIVGLGYIDLTKRVLGLTEFLDDSHFTNLESALVALGCKECLLPVDST 25
           IVAL P+F+ENGC VGLG++DLT+RVLGL EFLDDS FTN+ESALVALGC+ECLLP +S 
Sbjct: 144 IVALFPNFRENGCTVGLGFVDLTRRVLGLAEFLDDSQFTNVESALVALGCRECLLPSESA 203

Query: 24  KSSESRSL 1
           KSSE+R+L
Sbjct: 204 KSSETRTL 211


>ref|XP_003549805.1| PREDICTED: DNA mismatch repair protein Msh2-like [Glycine max]
          Length = 942

 Score =  323 bits (828), Expect = 1e-86
 Identities = 151/188 (80%), Positives = 177/188 (94%)
 Frame = -3

Query: 564 FLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTTTALRQLGNGANSLSSVSV 385
           FLSF+KTLP+D RAVRFFDRRDYYT+HGENATFIAKTYY TTTA+RQLG+G+N+LSSVSV
Sbjct: 25  FLSFFKTLPDDPRAVRFFDRRDYYTAHGENATFIAKTYYHTTTAMRQLGSGSNALSSVSV 84

Query: 384 SKNMFEMIVRDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDILFANNDMQDSPV 205
           S+NMFE I RDLLLERTDHTLELYEGSGSNWRLVKSGTPGN+GSFED+LFAN++MQDSPV
Sbjct: 85  SRNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGNIGSFEDVLFANSEMQDSPV 144

Query: 204 IVALVPSFKENGCIVGLGYIDLTKRVLGLTEFLDDSHFTNLESALVALGCKECLLPVDST 25
           +VAL  +++ENGC +GLG++DLTKRVLG+ EFLDDSHFTN+ESA VALGCKEC+LP++S 
Sbjct: 145 VVALSLNYRENGCTIGLGFVDLTKRVLGMAEFLDDSHFTNVESAFVALGCKECILPIESG 204

Query: 24  KSSESRSL 1
           KS+E+R L
Sbjct: 205 KSTENRML 212


>ref|XP_002317931.1| predicted protein [Populus trichocarpa] gi|222858604|gb|EEE96151.1|
           predicted protein [Populus trichocarpa]
          Length = 944

 Score =  320 bits (819), Expect = 1e-85
 Identities = 154/188 (81%), Positives = 172/188 (91%)
 Frame = -3

Query: 564 FLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTTTALRQLGNGANSLSSVSV 385
           FLSF+KTLP+D RAVR FDRRDYYT H ENATFIAKTYY TTTALRQLG+G+N LSSVS+
Sbjct: 26  FLSFFKTLPHDPRAVRVFDRRDYYTVHAENATFIAKTYYHTTTALRQLGSGSNGLSSVSI 85

Query: 384 SKNMFEMIVRDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDILFANNDMQDSPV 205
           SKNMFE I RDLLLERTDHTLELYEGSGSNW+LVKSGTPGNLGSFED+LFANNDMQDSPV
Sbjct: 86  SKNMFETIARDLLLERTDHTLELYEGSGSNWKLVKSGTPGNLGSFEDVLFANNDMQDSPV 145

Query: 204 IVALVPSFKENGCIVGLGYIDLTKRVLGLTEFLDDSHFTNLESALVALGCKECLLPVDST 25
           +VAL+ +F+E GC VGL Y+DLTKRVLGL EFLDDSHFTN+ESALVAL CKECLLP++S 
Sbjct: 146 VVALLLNFREKGCTVGLSYVDLTKRVLGLAEFLDDSHFTNVESALVALSCKECLLPMESG 205

Query: 24  KSSESRSL 1
           KS++ R+L
Sbjct: 206 KSNDCRTL 213


>ref|NP_001234067.1| mismatch repair protein [Solanum lycopersicum]
           gi|296034481|gb|ADG85112.1| mismatch repair protein
           [Solanum lycopersicum]
          Length = 943

 Score =  318 bits (814), Expect = 5e-85
 Identities = 153/188 (81%), Positives = 169/188 (89%)
 Frame = -3

Query: 564 FLSFYKTLPNDNRAVRFFDRRDYYTSHGENATFIAKTYYRTTTALRQLGNGANSLSSVSV 385
           FLSF+KTLP D RAVR FDRRDYYT+HG++ATFIAKTYY TTTALRQLGNG  +LSSVSV
Sbjct: 24  FLSFFKTLPKDVRAVRLFDRRDYYTAHGDDATFIAKTYYHTTTALRQLGNGVGALSSVSV 83

Query: 384 SKNMFEMIVRDLLLERTDHTLELYEGSGSNWRLVKSGTPGNLGSFEDILFANNDMQDSPV 205
           S+NMFE I RD+LLER D TLELYEGSGSNW+LVKSGTPGN GSFEDILFANN+MQDSPV
Sbjct: 84  SRNMFETIARDILLERMDRTLELYEGSGSNWKLVKSGTPGNFGSFEDILFANNEMQDSPV 143

Query: 204 IVALVPSFKENGCIVGLGYIDLTKRVLGLTEFLDDSHFTNLESALVALGCKECLLPVDST 25
           IVAL P F +NGC VGLGY+D+TKRVLGL EFLDDSHFTNLESALVALGC+ECL+P ++ 
Sbjct: 144 IVALAPKFDQNGCTVGLGYVDITKRVLGLAEFLDDSHFTNLESALVALGCRECLVPTETG 203

Query: 24  KSSESRSL 1
           KSSESR L
Sbjct: 204 KSSESRPL 211


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