BLASTX nr result

ID: Angelica22_contig00036293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036293
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15973.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   104   9e-21
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]   104   9e-21
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002525630.1| pentatricopeptide repeat-containing protein,...    89   3e-16

>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
 Frame = +2

Query: 83  MATLNSPLICLPKNHKL-----TSLTDNNYRIFSTHPTLTLIDQCPNLKHLRQIQAHMLR 247
           MA  N  L+ LP++H L      S+T NN R F+ HPTL+LIDQC   K L+QI A MLR
Sbjct: 1   MAIPNPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLR 60

Query: 248 TGLFFDPFSSSKIITALALPPVSSIEYARKVFD 346
           TGLFFDPFS+S++ITA AL P  S++YA++VFD
Sbjct: 61  TGLFFDPFSASRLITAAALSPFPSLDYAQQVFD 93


>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
 Frame = +2

Query: 83  MATLNSPLICLPKNHKL-----TSLTDNNYRIFSTHPTLTLIDQCPNLKHLRQIQAHMLR 247
           MA  N  L+ LP++H L      S+T NN R F+ HPTL+LIDQC   K L+QI A MLR
Sbjct: 1   MAIPNPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLR 60

Query: 248 TGLFFDPFSSSKIITALALPPVSSIEYARKVFD 346
           TGLFFDPFS+S++ITA AL P  S++YA++VFD
Sbjct: 61  TGLFFDPFSASRLITAAALSPFPSLDYAQQVFD 93


>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/93 (56%), Positives = 67/93 (72%), Gaps = 5/93 (5%)
 Frame = +2

Query: 83  MATLNSPLICLPKNHKL-----TSLTDNNYRIFSTHPTLTLIDQCPNLKHLRQIQAHMLR 247
           MA  N  L+ LP++H L      S+T NN R F+ HPTL+LIDQC   K L+QI A MLR
Sbjct: 1   MAIPNPCLVSLPRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSETKQLKQIHAQMLR 60

Query: 248 TGLFFDPFSSSKIITALALPPVSSIEYARKVFD 346
           TGLFFDPFS+S++ITA AL P  S++YA++VFD
Sbjct: 61  TGLFFDPFSASRLITAAALSPFPSLDYAQQVFD 93


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/88 (53%), Positives = 60/88 (68%)
 Frame = +2

Query: 83  MATLNSPLICLPKNHKLTSLTDNNYRIFSTHPTLTLIDQCPNLKHLRQIQAHMLRTGLFF 262
           MATL +PL  +P +   T LT NN +  +      LID+C N KHL+Q+ AHMLRTGLFF
Sbjct: 1   MATLGNPLASVPISSNPTILTANNEQKSNPSTVPILIDKCANKKHLKQLHAHMLRTGLFF 60

Query: 263 DPFSSSKIITALALPPVSSIEYARKVFD 346
           DP S++K+ TA AL   SS++YA KVFD
Sbjct: 61  DPPSATKLFTACALSSPSSLDYACKVFD 88


>ref|XP_002525630.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535066|gb|EEF36748.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 765

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 45/89 (50%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
 Frame = +2

Query: 83  MATLNSPLICLPKNHKLTSLTDNNYRIFSTHP-TLTLIDQCPNLKHLRQIQAHMLRTGLF 259
           MA+LNSPL+ +P     + LT  N R  ++H  TL+LIDQC NLKHL+++ A +LR+GLF
Sbjct: 1   MASLNSPLVSIPLRPNHSILTVPNGRPVTSHSQTLSLIDQCTNLKHLKELHATILRSGLF 60

Query: 260 FDPFSSSKIITALALPPVSSIEYARKVFD 346
           F P+++SK+ +  AL   SS++YARKVF+
Sbjct: 61  FHPYNASKLFSVAALSSFSSLDYARKVFE 89


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