BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036258
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospe...   130   1e-28
gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    98   8e-19
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    97   1e-18
gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein ...    91   8e-17
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118...    91   1e-16

>gb|AAC12735.1| putative retrovirus-related polyprotein [Lithospermum
           erythrorhizon]
          Length = 244

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/105 (57%), Positives = 73/105 (69%)
 Frame = -1

Query: 320 ISRGNLYALLGXXXXXXXXXXXXXTGGDPCECTRLWHRWLGHMSEKGLNYFGEEGLLKNL 141
           +S GNLY L+G                D  ECT +WH  LGHMSEKGL+    +GLLKN+
Sbjct: 77  VSHGNLYPLVGTMVTGDLAVGVVGHK-DQTECTMIWHMRLGHMSEKGLSLLSGQGLLKNM 135

Query: 140 KKACMDFCEHCVYGKAHRVQFKASKHRSRGILDYVHTDVWGPAPV 6
           KK+CM+FCEH VYGK HR++F  SKH+SRG+LDYVHTD+WGPA V
Sbjct: 136 KKSCMEFCEHWVYGKTHRLKFFTSKHKSRGLLDYVHTDLWGPAKV 180


>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 42/73 (57%), Positives = 52/73 (71%)
 Frame = -1

Query: 230 ECTRLWHRWLGHMSEKGLNYFGEEGLLKNLKKACMDFCEHCVYGKAHRVQFKASKHRSRG 51
           E T+LWH  LGH  EK L  F ++GLLK  K   ++FCEHCV GK  RV+F  + H ++G
Sbjct: 356 EATKLWHMRLGHAGEKSLQIFTKQGLLKGTKACKLEFCEHCVLGKQRRVKFGTAIHNTKG 415

Query: 50  ILDYVHTDVWGPA 12
           ILDYVH+DVWGPA
Sbjct: 416 ILDYVHSDVWGPA 428


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 39/74 (52%), Positives = 52/74 (70%)
 Frame = -1

Query: 227 CTRLWHRWLGHMSEKGLNYFGEEGLLKNLKKACMDFCEHCVYGKAHRVQFKASKHRSRGI 48
           CT LWHR LGHMSEKGL+   ++GLL   +   + FCE CV GK  RV+F    H + G+
Sbjct: 744 CTELWHRRLGHMSEKGLSILSKQGLLSGAETGKLKFCETCVMGKQRRVKFSMGSHTTNGV 803

Query: 47  LDYVHTDVWGPAPV 6
           L+Y+H+D+WGP+PV
Sbjct: 804 LEYIHSDLWGPSPV 817


>gb|AAK52561.1|AC079853_14 Putative retroelement pol polyprotein [Oryza sativa Japonica Group]
           gi|108708632|gb|ABF96427.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1326

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 40/71 (56%), Positives = 49/71 (69%)
 Frame = -1

Query: 224 TRLWHRWLGHMSEKGLNYFGEEGLLKNLKKACMDFCEHCVYGKAHRVQFKASKHRSRGIL 45
           T LWH  LGHMSE G+    +  LL    +  M FCEHCV+GK  RV+F  S HR++GIL
Sbjct: 426 TNLWHMRLGHMSELGMAELMKRNLLDGCTQGKMKFCEHCVFGKHKRVKFNTSVHRTKGIL 485

Query: 44  DYVHTDVWGPA 12
           DYVHTD+WGP+
Sbjct: 486 DYVHTDLWGPS 496


>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
           copia LTR rider [Solanum lycopersicum]
          Length = 1307

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 37/75 (49%), Positives = 51/75 (68%)
 Frame = -1

Query: 230 ECTRLWHRWLGHMSEKGLNYFGEEGLLKNLKKACMDFCEHCVYGKAHRVQFKASKHRSRG 51
           + T+LWH  LGHM E+G+    +E LL   K   ++FCEHCV+GK HR +F  + HR++G
Sbjct: 409 DMTKLWHIRLGHMGERGMQILSKEDLLAGHKVKSLEFCEHCVFGKLHRNKFPKAIHRTKG 468

Query: 50  ILDYVHTDVWGPAPV 6
            LDY+H+D WGP  V
Sbjct: 469 TLDYIHSDCWGPCRV 483