BLASTX nr result

ID: Angelica22_contig00036246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036246
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog ...   117   1e-24
ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp....   108   5e-22
emb|CBI21655.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidop...   105   4e-21
ref|NP_001032141.1| DNA repair protein XRCC2-like protein [Arabi...   105   4e-21

>ref|XP_002272275.1| PREDICTED: DNA repair protein XRCC2 homolog [Vitis vinifera]
          Length = 315

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 2/100 (2%)
 Frame = -1

Query: 315 DESAKDMLARVSIXXXXXXXXXXXXF--RPGNVVEIVGPSPSAKTHLLMQAAIRCILPKE 142
           DESAK+ML+RVS                R GNVVEI GPSPSAKT +L+QAA+ CILPKE
Sbjct: 10  DESAKEMLSRVSAERSLMLLPPLHRVPLRLGNVVEIAGPSPSAKTQILIQAAVYCILPKE 69

Query: 141 WNGVRYGGLDHVVMFIDLDCRFDILHFSRLLEHQIRIAEG 22
           W GV YGGL+H+VMFIDLDCRFDIL  S+ L+H++    G
Sbjct: 70  WRGVHYGGLEHLVMFIDLDCRFDILCLSQSLKHRLMETSG 109


>ref|XP_002864907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310742|gb|EFH41166.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 389

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/102 (53%), Positives = 69/102 (67%), Gaps = 2/102 (1%)
 Frame = -1

Query: 318 GDESAKDMLARV--SIXXXXXXXXXXXXFRPGNVVEIVGPSPSAKTHLLMQAAIRCILPK 145
           GDE+AK ML+RV                 R GNVVEI G SPSAKT +L+QAAI CILPK
Sbjct: 12  GDETAKQMLSRVLKDRAFMLLPPLHRVPLRAGNVVEITGASPSAKTQILIQAAISCILPK 71

Query: 144 EWNGVRYGGLDHVVMFIDLDCRFDILHFSRLLEHQIRIAEGL 19
            WNG+ YGGL  +V+F+DLDCRFD+L  S++L+H++  A  L
Sbjct: 72  TWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANRL 113


>emb|CBI21655.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/72 (69%), Positives = 59/72 (81%)
 Frame = -1

Query: 237 RPGNVVEIVGPSPSAKTHLLMQAAIRCILPKEWNGVRYGGLDHVVMFIDLDCRFDILHFS 58
           R GNVVEI GPSPSAKT +L+QAA+ CILPKEW GV YGGL+H+VMFIDLDCRFDIL  S
Sbjct: 23  RLGNVVEIAGPSPSAKTQILIQAAVYCILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLS 82

Query: 57  RLLEHQIRIAEG 22
           + L+H++    G
Sbjct: 83  QSLKHRLMETSG 94


>ref|NP_201257.2| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|332010527|gb|AED97910.1| DNA repair protein
           XRCC2-like protein [Arabidopsis thaliana]
          Length = 342

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = -1

Query: 318 GDESAKDMLARV--SIXXXXXXXXXXXXFRPGNVVEIVGPSPSAKTHLLMQAAIRCILPK 145
           GDE+AK ML+RV                 R GNVVEI G S SAKT +L+QAAI CILPK
Sbjct: 12  GDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAISCILPK 71

Query: 144 EWNGVRYGGLDHVVMFIDLDCRFDILHFSRLLEHQIRIAEGL 19
            WNG+ YGGL  +V+F+DLDCRFD+L  S++L+H++  A  L
Sbjct: 72  TWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWL 113


>ref|NP_001032141.1| DNA repair protein XRCC2-like protein [Arabidopsis thaliana]
           gi|51969010|dbj|BAD43197.1| putative protein
           [Arabidopsis thaliana] gi|332010529|gb|AED97912.1| DNA
           repair protein XRCC2-like protein [Arabidopsis thaliana]
          Length = 295

 Score =  105 bits (262), Expect = 4e-21
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
 Frame = -1

Query: 318 GDESAKDMLARV--SIXXXXXXXXXXXXFRPGNVVEIVGPSPSAKTHLLMQAAIRCILPK 145
           GDE+AK ML+RV                 R GNVVEI G S SAKT +L+QAAI CILPK
Sbjct: 12  GDETAKQMLSRVLKDRAFLLIPPLHRVPLRAGNVVEITGASTSAKTQILIQAAISCILPK 71

Query: 144 EWNGVRYGGLDHVVMFIDLDCRFDILHFSRLLEHQIRIAEGL 19
            WNG+ YGGL  +V+F+DLDCRFD+L  S++L+H++  A  L
Sbjct: 72  TWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWL 113


Top