BLASTX nr result
ID: Angelica22_contig00036076
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00036076
(599 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 87 1e-23
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 78 9e-21
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 83 2e-19
gb|ABW81094.1| RT6non-ltr [Cleome spinosa] 87 2e-19
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 68 6e-19
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 86.7 bits (213), Expect(2) = 1e-23
Identities = 52/132 (39%), Positives = 73/132 (55%)
Frame = +2
Query: 50 EIHGFFKGEIGLHQGDPLSL*LFSLVMQVLAIMIKRRIEEDGNSKYHARCEKLEISHLSF 229
E+ GFF+ E GL QG LS L+ + M VL+ M+ + E S YH RC + ++HL F
Sbjct: 792 ELSGFFRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKIS-YHPRCRNMNLTHLCF 850
Query: 230 AIDLFLFSHGDPLSVQILKDSHDEFGAASCLWPNAGKSSSFSCKVSRENQMFINNIMGFE 409
A D+ +FS G S+Q ++F A S L + KS+ F +S + I FE
Sbjct: 851 ADDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFE 910
Query: 410 VGTFPVKYLGVP 445
+GT PVKYLG+P
Sbjct: 911 LGTLPVKYLGLP 922
Score = 48.9 bits (115), Expect(2) = 1e-23
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +3
Query: 447 LPLISTRLLHADCLPLIENVQYIIQKGQNNWLSFAGRIQLALSVLSSM 590
LPL++ R+ +D LPL+E ++ I N +LSFAGR+QL SVLSS+
Sbjct: 921 LPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSI 968
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 78.2 bits (191), Expect(3) = 9e-21
Identities = 43/127 (33%), Positives = 71/127 (55%)
Frame = +2
Query: 65 FKGEIGLHQGDPLSL*LFSLVMQVLAIMIKRRIEEDGNSKYHARCEKLEISHLSFAIDLF 244
F+ GL QGDP+S LF+L M+ L+ ++ ++ + +H +CE+L I+HL FA DL
Sbjct: 635 FQARKGLRQGDPMSPFLFALCMEYLSRCLEE-LKGSPDFNFHPKCERLNITHLMFADDLL 693
Query: 245 LFSHGDPLSVQILKDSHDEFGAASCLWPNAGKSSSFSCKVSRENQMFINNIMGFEVGTFP 424
+F D S+ + + +F AS L + KS+ + C V E + + + ++G P
Sbjct: 694 MFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELP 753
Query: 425 VKYLGVP 445
+YLGVP
Sbjct: 754 FRYLGVP 760
Score = 47.0 bits (110), Expect(3) = 9e-21
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +3
Query: 447 LPLISTRLLHADCLPLIENVQYIIQKGQNNWLSFAGRIQLALSVLSSMQVY 599
+PL S +L +A C PL+E + Q LS+AGR+QL S+LSSMQ Y
Sbjct: 759 VPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNY 809
Score = 20.4 bits (41), Expect(3) = 9e-21
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 3 WIKECVST 26
WI ECVST
Sbjct: 613 WIMECVST 620
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 82.8 bits (203), Expect(3) = 2e-19
Identities = 49/129 (37%), Positives = 71/129 (55%)
Frame = +2
Query: 59 GFFKGEIGLHQGDPLSL*LFSLVMQVLAIMIKRRIEEDGNSKYHARCEKLEISHLSFAID 238
GFFK GL QGDPLS LF L M+ + ++ R E G YH + L ISHL FA D
Sbjct: 642 GFFKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYES-GLIHYHPKASNLSISHLMFADD 700
Query: 239 LFLFSHGDPLSVQILKDSHDEFGAASCLWPNAGKSSSFSCKVSRENQMFINNIMGFEVGT 418
+ +F G S+ + ++ D+F + S L N KS + ++ + + N GF +GT
Sbjct: 701 VMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLN-QLESNANAAYGFPIGT 759
Query: 419 FPVKYLGVP 445
P++YLG+P
Sbjct: 760 LPIRYLGLP 768
Score = 36.6 bits (83), Expect(3) = 2e-19
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 447 LPLISTRLLHADCLPLIENVQYIIQKGQNNWLSFAGRIQLALSVL 581
LPL++ +L A+ PL+E + + N LSFAGRIQL SV+
Sbjct: 767 LPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVI 811
Score = 21.9 bits (45), Expect(3) = 2e-19
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 3 WIKECVSTP 29
WI +C+STP
Sbjct: 622 WISQCISTP 630
>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
Length = 459
Score = 86.7 bits (213), Expect(2) = 2e-19
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 3/135 (2%)
Frame = +2
Query: 50 EIHGFFKGEIGLHQGDPLSL*LFSLVMQVLAIMIKRRIEED---GNSKYHARCEKLEISH 220
E+ G FKG+ GL QGDPLS LF + M+VL+ R++++ G + H++C ++H
Sbjct: 9 ELTGLFKGKRGLRQGDPLSPYLFIIAMEVLS----RKLDQAASIGQLQLHSKCANPLLTH 64
Query: 221 LSFAIDLFLFSHGDPLSVQILKDSHDEFGAASCLWPNAGKSSSFSCKVSRENQMFINNIM 400
L FA DL +FS S+Q +++ + FG S L N GK F ++ + +++ M
Sbjct: 65 LIFADDLVIFSKASRQSMQAVQNCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQELSSCM 124
Query: 401 GFEVGTFPVKYLGVP 445
G +G FP+KYLG+P
Sbjct: 125 GITLGNFPMKYLGLP 139
Score = 34.7 bits (78), Expect(2) = 2e-19
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 447 LPLISTRLLHADCLPLIENVQYIIQKGQNNWLSFAGRIQLALSVLSSM 590
LP+ + RL AD PL+E ++ + + LS+AG+IQL V+ M
Sbjct: 138 LPVNTHRLTKADYEPLLEKIRAKVSNWSSKLLSYAGKIQLVSVVIYGM 185
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 67.8 bits (164), Expect(2) = 6e-19
Identities = 44/122 (36%), Positives = 64/122 (52%)
Frame = +2
Query: 80 GLHQGDPLSL*LFSLVMQVLAIMIKRRIEEDGNSKYHARCEKLEISHLSFAIDLFLFSHG 259
GL QG LS LF + M VL+ M+ + E YH RC + ++HL FA D+ +FS G
Sbjct: 910 GLRQGCSLSPYLFVICMNVLSAMLDKGAVEK-RFGYHPRCRNMGLTHLCFADDIMVFSAG 968
Query: 260 DPLSVQILKDSHDEFGAASCLWPNAGKSSSFSCKVSRENQMFINNIMGFEVGTFPVKYLG 439
S++ + +F A S L + KS+ F +S E I F+ G+ PV+YLG
Sbjct: 969 SAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLG 1028
Query: 440 VP 445
+P
Sbjct: 1029 LP 1030
Score = 51.6 bits (122), Expect(2) = 6e-19
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +3
Query: 447 LPLISTRLLHADCLPLIENVQYIIQKGQNNWLSFAGRIQLALSVLSSM 590
LPL++ R+ ADCLPL+E ++ I +N +LS+AGR+QL SV+SS+
Sbjct: 1029 LPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSL 1076