BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00036027
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containi...    59   6e-13
ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|2...    54   2e-12
ref|XP_002527661.1| pentatricopeptide repeat-containing protein,...    52   5e-11
ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago t...    47   2e-07

>ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
           gi|297742067|emb|CBI33854.3| unnamed protein product
           [Vitis vinifera]
          Length = 767

 Score = 58.5 bits (140), Expect(2) = 6e-13
 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
 Frame = +2

Query: 137 YISGFCRAGVGELALDYICMLRCKHWPLSAYNSNAIIP--------DEALRVLEEMKSCG 292
           YI G CR G  E ALD++  L   +  ++ Y  NAII         DEAL+VLEEMKSCG
Sbjct: 296 YIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 293 VAPNLYRY 316
           ++P++Y Y
Sbjct: 356 ISPDVYTY 363



 Score = 40.0 bits (92), Expect(2) = 6e-13
 Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
 Frame = +3

Query: 3   YTYTIMISYYCKRLIPNMET----ATDILKEMKKSRNEPTVVTSS 125
           +TYTIM+++YCK      +     AT+IL+EM+++   PTVVT S
Sbjct: 250 FTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYS 294


>ref|XP_002326536.1| predicted protein [Populus trichocarpa] gi|222833858|gb|EEE72335.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 54.3 bits (129), Expect(2) = 2e-12
 Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 8/68 (11%)
 Frame = +2

Query: 137 YISGFCRAGVGELALDYICMLRCKHWPLSAYNSNAII--------PDEALRVLEEMKSCG 292
           YI G CR G  E A + I  LR  + PL+ Y  NA+I        PDEAL++LEEMK  G
Sbjct: 231 YIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEG 290

Query: 293 VAPNLYRY 316
           ++P++Y Y
Sbjct: 291 ISPDIYSY 298



 Score = 42.4 bits (98), Expect(2) = 2e-12
 Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
 Frame = +3

Query: 3   YTYTIMISYYCKRLIP---NMETATDILKEMKKSRNEPTVVTSSICLN 137
           YTYTIMI++YCK       +ME A+ IL+EM++    PTVVT  + ++
Sbjct: 186 YTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIH 233


>ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532966|gb|EEF34732.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 766

 Score = 52.4 bits (124), Expect(2) = 5e-11
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
 Frame = +2

Query: 137 YISGFCRAGVGELALDYICMLRCKHWPLSAYNSNAIIPD--------EALRVLEEMKSCG 292
           YI G CRAG  E AL  I  LR ++ PL++Y  NA+I +        EA  +LE+M+S G
Sbjct: 294 YIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHG 353

Query: 293 VAPNLYRY 316
           ++P  Y Y
Sbjct: 354 ISPTAYSY 361



 Score = 39.7 bits (91), Expect(2) = 5e-11
 Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
 Frame = +3

Query: 3   YTYTIMISYYCKRLIP---NMETATDILKEMKKSRNEPTVVT 119
           +TYTIM++YYCK       ++  AT++L+EM+ +   PTVVT
Sbjct: 249 FTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290


>ref|XP_003616199.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355517534|gb|AES99157.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 872

 Score = 47.4 bits (111), Expect(2) = 2e-07
 Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
 Frame = +2

Query: 137 YISGFCRAGVGELALDYICMLRCKHWPLSAYNSNAIIP--------DEALRVLEEMKSCG 292
           YI G C+AG   +    IC +  ++ P++ +  NAI+         DEA +VLEEMKS G
Sbjct: 209 YIKGLCKAGSLRVVWKLICNMCRENQPINNHCFNAIMYGLCQRGELDEASQVLEEMKSIG 268

Query: 293 VAPNLYRYF 319
           + P++Y Y+
Sbjct: 269 ILPDVYGYY 277



 Score = 32.7 bits (73), Expect(2) = 2e-07
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 3   YTYTIMISYYCK--RLIPNMETATDILKEMKKSRNEPTVVTSS 125
           +TYTIM+++YC+  R   ++  A++I   + +S   P VVT S
Sbjct: 165 HTYTIMMNFYCRDVRCSADISPASEIFGNIYRSGETPNVVTYS 207