BLASTX nr result

ID: Angelica22_contig00035986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035986
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a puta...   100   9e-20
ref|NP_173539.1| Mitochondrial transcription termination factor ...   100   9e-20
ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257...   100   1e-19
emb|CAN77551.1| hypothetical protein VITISV_017395 [Vitis vinifera]   100   1e-19
ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252...   100   2e-19

>gb|AAF80646.1|AC012190_2 Contains similarity to F28O16.19 a putative translation initiation
            factor IF-2 gi|6143896 from Arabidopsis thaliana
            gb|AC010718. It is a member of Elongation factor Tu
            family. ESTs gb|AI994592 and gb|T20793 come from thias
            gene [Arabidopsis thaliana]
          Length = 1552

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/104 (50%), Positives = 68/104 (65%)
 Frame = -2

Query: 351  VKLKTPKKADLVVALFKKHGFTNTQIENVVKKFPAVLSSDCEKTIMPKLEYFSSKGVSRS 172
            VKL + KK D V+ALFK HGFTN QI +V+K FP VLS   E  I PKL +FSS G S S
Sbjct: 1242 VKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTS 1301

Query: 171  ELAKFVSGSPGVLRVSLDKKIIPTWNSFESLLISTERTFAATKR 40
            + AK +S SP +L  SL K++IP ++S +S+L+  E      KR
Sbjct: 1302 DTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR 1345


>ref|NP_173539.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|332191949|gb|AEE30070.1|
           Mitochondrial transcription termination factor family
           protein [Arabidopsis thaliana]
          Length = 390

 Score =  100 bits (250), Expect = 9e-20
 Identities = 53/104 (50%), Positives = 68/104 (65%)
 Frame = -2

Query: 351 VKLKTPKKADLVVALFKKHGFTNTQIENVVKKFPAVLSSDCEKTIMPKLEYFSSKGVSRS 172
           VKL + KK D V+ALFK HGFTN QI +V+K FP VLS   E  I PKL +FSS G S S
Sbjct: 80  VKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTS 139

Query: 171 ELAKFVSGSPGVLRVSLDKKIIPTWNSFESLLISTERTFAATKR 40
           + AK +S SP +L  SL K++IP ++S +S+L+  E      KR
Sbjct: 140 DTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKR 183


>ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257952 [Vitis vinifera]
          Length = 389

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/105 (42%), Positives = 71/105 (67%)
 Frame = -2

Query: 351 VKLKTPKKADLVVALFKKHGFTNTQIENVVKKFPAVLSSDCEKTIMPKLEYFSSKGVSRS 172
           ++ +TP+K D V+A F  HGF+ +Q   +VK  P +L+SD +KT++PKL++F SKG S+ 
Sbjct: 78  LRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKGASKP 137

Query: 171 ELAKFVSGSPGVLRVSLDKKIIPTWNSFESLLISTERTFAATKRF 37
           ++AK V  +PG+L+ SL+ +IIP++N  +  L S E      KRF
Sbjct: 138 DVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRF 182


>emb|CAN77551.1| hypothetical protein VITISV_017395 [Vitis vinifera]
          Length = 296

 Score =  100 bits (249), Expect = 1e-19
 Identities = 45/105 (42%), Positives = 71/105 (67%)
 Frame = -2

Query: 351 VKLKTPKKADLVVALFKKHGFTNTQIENVVKKFPAVLSSDCEKTIMPKLEYFSSKGVSRS 172
           ++ +TP+K D V+A F  HGF+ +Q   +VK  P +L+SD +KT++PKL++F SKG S+ 
Sbjct: 78  LRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKLQFFYSKGASKP 137

Query: 171 ELAKFVSGSPGVLRVSLDKKIIPTWNSFESLLISTERTFAATKRF 37
           ++AK V  +PG+L+ SL+ +IIP++N  +  L S E      KRF
Sbjct: 138 DVAKIVVSTPGILKRSLENQIIPSFNFLKDFLQSDEMAITVVKRF 182


>ref|XP_002274845.1| PREDICTED: uncharacterized protein LOC100252802 [Vitis vinifera]
          Length = 399

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/102 (46%), Positives = 69/102 (67%)
 Frame = -2

Query: 342 KTPKKADLVVALFKKHGFTNTQIENVVKKFPAVLSSDCEKTIMPKLEYFSSKGVSRSELA 163
           +TP K + V+A F  HGF+ +QI  +VK  P +L+SD +KT++PKL++F SKG SR ++A
Sbjct: 77  ETPDKPNSVLAFFNSHGFSKSQISKIVKSLPRLLASDPDKTLLPKLQFFYSKGASRPDVA 136

Query: 162 KFVSGSPGVLRVSLDKKIIPTWNSFESLLISTERTFAATKRF 37
           K V  +PG+L  SL+ +IIP++N F+  L S E      KRF
Sbjct: 137 KIVVSTPGILYRSLENQIIPSFNFFKDFLQSDEMAITVIKRF 178


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