BLASTX nr result

ID: Angelica22_contig00035945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035945
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containi...   133   1e-29
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CBI21289.3| unnamed protein product [Vitis vinifera]              116   2e-24

>ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  152 bits (384), Expect = 3e-35
 Identities = 73/115 (63%), Positives = 90/115 (78%)
 Frame = -2

Query: 426 GMLKEALAIILKFVNFADSRIWGALLSASRVHENQLLAEFAAGMLFKLEPENAGYHTLLS 247
           G LKEAL +ILK V   DSRIWGALL+ASRVHE++ L E+AA  L +LEP+N GY+TL S
Sbjct: 606 GKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKLLELEPDNVGYYTLWS 665

Query: 246 NVQASLEGWSEVEEIRDYVQDSNLVKQPGWSCIEAKGFINGFVAGDRSHPQVTEI 82
           N++ASLE W EVEE+R  + + +L K+PGWSCIE KG I+GFV+GD SH QV EI
Sbjct: 666 NIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSGDTSHHQVEEI 720


>ref|XP_004170735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 402

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/122 (51%), Positives = 87/122 (71%)
 Frame = -2

Query: 420 LKEALAIILKFVNFADSRIWGALLSASRVHENQLLAEFAAGMLFKLEPENAGYHTLLSNV 241
           ++EA AIIL+  +  D RIWGAL+ A RV+ +  +A +AA  L +LEP+N GY+TLLSN 
Sbjct: 279 VREAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEPDNVGYYTLLSNS 338

Query: 240 QASLEGWSEVEEIRDYVQDSNLVKQPGWSCIEAKGFINGFVAGDRSHPQVTEIYETLCSL 61
           QAS+  W E E++R  V + +LVK+PGWS IE  G I+GFV+GDRSH +  EIY+ L  +
Sbjct: 339 QASVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNRTNEIYDVLVYI 398

Query: 60  SR 55
           +R
Sbjct: 399 NR 400


>ref|XP_004153972.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Cucumis sativus]
          Length = 591

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/122 (51%), Positives = 87/122 (71%)
 Frame = -2

Query: 420 LKEALAIILKFVNFADSRIWGALLSASRVHENQLLAEFAAGMLFKLEPENAGYHTLLSNV 241
           ++EA AIIL+  +  D RIWGAL+ A RV+ +  +A +AA  L +LEP+N GY+TLLSN 
Sbjct: 468 VREAFAIILRMTSLCDGRIWGALMGACRVYGDNKIANYAAHRLLELEPDNVGYYTLLSNS 527

Query: 240 QASLEGWSEVEEIRDYVQDSNLVKQPGWSCIEAKGFINGFVAGDRSHPQVTEIYETLCSL 61
           QAS+  W E E++R  V + +LVK+PGWS IE  G I+GFV+GDRSH +  EIY+ L  +
Sbjct: 528 QASVGQWHEAEKLRSLVYEKDLVKKPGWSFIELNGTIHGFVSGDRSHNRTNEIYDVLVYI 587

Query: 60  SR 55
           +R
Sbjct: 588 NR 589


>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/127 (47%), Positives = 82/127 (64%)
 Frame = -2

Query: 426 GMLKEALAIILKFVNFADSRIWGALLSASRVHENQLLAEFAAGMLFKLEPENAGYHTLLS 247
           G LKEA  +I       D  +WGALL A R+H+N  L E +A  LF+L+P+N GY+ LLS
Sbjct: 514 GYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLS 573

Query: 246 NVQASLEGWSEVEEIRDYVQDSNLVKQPGWSCIEAKGFINGFVAGDRSHPQVTEIYETLC 67
           N+ A    W +VE +R  +++S LVK PG+S ++ KG ++ F+ GDR HPQ  +IYE L 
Sbjct: 574 NIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLE 633

Query: 66  SLSRKLQ 46
            LS KLQ
Sbjct: 634 KLSMKLQ 640


>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/127 (47%), Positives = 82/127 (64%)
 Frame = -2

Query: 426 GMLKEALAIILKFVNFADSRIWGALLSASRVHENQLLAEFAAGMLFKLEPENAGYHTLLS 247
           G LKEA  +I       D  +WGALL A R+H+N  L E +A  LF+L+P+N GY+ LLS
Sbjct: 360 GYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLS 419

Query: 246 NVQASLEGWSEVEEIRDYVQDSNLVKQPGWSCIEAKGFINGFVAGDRSHPQVTEIYETLC 67
           N+ A    W +VE +R  +++S LVK PG+S ++ KG ++ F+ GDR HPQ  +IYE L 
Sbjct: 420 NIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLE 479

Query: 66  SLSRKLQ 46
            LS KLQ
Sbjct: 480 KLSMKLQ 486


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