BLASTX nr result

ID: Angelica22_contig00035937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035937
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   100   1e-19
emb|CBI15364.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...    95   7e-18
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...    94   2e-17
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...    92   4e-17

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = -2

Query: 233 MKIRSMKLREAHKSNGVASQSWILYDINGERIVTALASDTSICIHDAFLSSVSPKVLRNH 54
           MK RS+KLREAHKS+G AS   IL+D+  + ++T+ ++D SICIHD  L S SP++LR+H
Sbjct: 1   MKGRSLKLREAHKSSGAASFCSILWDLRAQHLLTSSSNDLSICIHDPLLPSNSPQILRHH 60

Query: 53  RDGVTCLAISPNSTCLA 3
           RDGVT LA+SPNSTCLA
Sbjct: 61  RDGVTALALSPNSTCLA 77


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/77 (62%), Positives = 62/77 (80%)
 Frame = -2

Query: 233 MKIRSMKLREAHKSNGVASQSWILYDINGERIVTALASDTSICIHDAFLSSVSPKVLRNH 54
           MK RS+KLREAHKS+G AS   IL+D+  + ++T+ ++D SICIHD  L S SP++LR+H
Sbjct: 1   MKGRSLKLREAHKSSGAASFCSILWDLRAQHLLTSSSNDLSICIHDPLLPSNSPQILRHH 60

Query: 53  RDGVTCLAISPNSTCLA 3
           RDGVT LA+SPNSTCLA
Sbjct: 61  RDGVTALALSPNSTCLA 77


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
 Frame = -2

Query: 233 MKIRSMKLREAHKSNGVASQSW--ILYDINGERIVTALASDTSICIHDAFLSSVSPKVLR 60
           MKIR++KLREAHKSNG    S+  IL+D     +VTA +SD +ICIHD  L S  P++LR
Sbjct: 1   MKIRTLKLREAHKSNGGHGPSFCSILWDHQTRHLVTASSSDPTICIHDPLLLSNGPRILR 60

Query: 59  NHRDGVTCLAISPNSTCLA 3
           +HRDGVT L++SPNSTCLA
Sbjct: 61  HHRDGVTALSLSPNSTCLA 79


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 972

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 47/79 (59%), Positives = 61/79 (77%), Gaps = 2/79 (2%)
 Frame = -2

Query: 233 MKIRSMKLREAH--KSNGVASQSWILYDINGERIVTALASDTSICIHDAFLSSVSPKVLR 60
           MK+RSMKL+EAH  KS G A  S +L+D   + ++TA +SD +ICIHD+   S++PK LR
Sbjct: 1   MKVRSMKLKEAHTAKSGGAAFCS-VLWDQKAKHLITASSSDVAICIHDSLFPSLAPKTLR 59

Query: 59  NHRDGVTCLAISPNSTCLA 3
           +HRDGVT LA+SPNSTCLA
Sbjct: 60  HHRDGVTALALSPNSTCLA 78


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 994

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = -2

Query: 233 MKIRSMKLREAHKSNG-VASQSWILYDINGERIVTALASDTSICIHDAFLSSVSPKVLRN 57
           MK+RSMKL+EAH + G  AS   +L+D   + +VTA +SD ++CIHD    S +PK LR+
Sbjct: 1   MKVRSMKLKEAHAAKGGPASFCSVLWDQKAKHLVTASSSDVAVCIHDPLFPSFAPKTLRH 60

Query: 56  HRDGVTCLAISPNSTCLA 3
           HRDGVT LA+SPNSTCLA
Sbjct: 61  HRDGVTALALSPNSTCLA 78


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