BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica22_contig00035902
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]                       232   2e-59
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   226   2e-57
emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]         225   4e-57
gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-...   224   6e-57
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   224   8e-57

>gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays]
          Length = 1264

 Score =  232 bits (592), Expect = 2e-59
 Identities = 109/177 (61%), Positives = 141/177 (79%)
 Frame = -3

Query: 533  FLHGELEEEIYMDQPEGFVASGNERKVCKLIKSIYGLKQAPRDWHKKFDETVLESEFVVN 354
            FL+GEL+EEIYM+QP+GFV  G E KVCKL+KS+YGLKQAP+ WH+KFD T+  + F +N
Sbjct: 869  FLNGELDEEIYMEQPDGFVVKGQESKVCKLLKSLYGLKQAPKQWHEKFDTTLTSAGFAIN 928

Query: 353  ESDKCVYYMVKGSECVILCLYVDDILLFGTNIEIINETKAFLKRHFEMKDMGEASVILGI 174
            E+D+CVYY   G E VILCLYVDDIL+FGTNI++INE K+FL + F+MKD+GEA VIL I
Sbjct: 929  EADRCVYYRCGGGEGVILCLYVDDILIFGTNIDVINEVKSFLSKSFDMKDLGEADVILNI 988

Query: 173  KLTQSIDGITLSQSHYIEKSILEKYGYSNCRIASTTYDPKVALVKNS*GVPVSQLRY 3
            KL ++  GITLSQSHY+EK +L+++G+S C+ + T YDP V L KN   + + QLRY
Sbjct: 989  KLIKADGGITLSQSHYVEK-VLKRFGFSECKPSPTPYDPSVTLRKNK-RIGLDQLRY 1043


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/177 (61%), Positives = 137/177 (77%)
 Frame = -3

Query: 533  FLHGELEEEIYMDQPEGFVASGNERKVCKLIKSIYGLKQAPRDWHKKFDETVLESEFVVN 354
            FL+GELEEEIYM QPEGFV  G E KVC+LIKS+YGLKQAPR WH+KF+ T+  + F VN
Sbjct: 914  FLNGELEEEIYMQQPEGFVVKGQESKVCRLIKSLYGLKQAPRQWHEKFNNTLTTAGFCVN 973

Query: 353  ESDKCVYYMVKGSECVILCLYVDDILLFGTNIEIINETKAFLKRHFEMKDMGEASVILGI 174
            E+DKCVYY   G + VI+CLYVDDIL+FGT++E I ETK FL ++F+MKD+GEA VIL I
Sbjct: 974  EADKCVYYRFSGGKGVIMCLYVDDILIFGTDLEAIMETKLFLSKNFDMKDLGEADVILNI 1033

Query: 173  KLTQSIDGITLSQSHYIEKSILEKYGYSNCRIASTTYDPKVALVKNS*GVPVSQLRY 3
            KL +  DGITLSQSHY+EK ++ ++G+ +C+  +T YDP   L K   G PV+QL Y
Sbjct: 1034 KLIKGEDGITLSQSHYVEK-VMTRFGHMDCKPVTTPYDPSYTLSKYE-GEPVNQLLY 1088


>emb|CAE05729.1| OSJNBb0017I01.9 [Oryza sativa Japonica Group]
          Length = 478

 Score =  225 bits (573), Expect = 4e-57
 Identities = 108/177 (61%), Positives = 139/177 (78%)
 Frame = -3

Query: 533 FLHGELEEEIYMDQPEGFVASGNERKVCKLIKSIYGLKQAPRDWHKKFDETVLESEFVVN 354
           FL+GEL+EEIYMDQP+GFV  G E KVCKL+KS+YGLKQAP+ WH+KFD+T+  + F VN
Sbjct: 94  FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVN 153

Query: 353 ESDKCVYYMVKGSECVILCLYVDDILLFGTNIEIINETKAFLKRHFEMKDMGEASVILGI 174
           E+DKCVYY   G E VILCLYVDDIL+FGTN+E+INE K+FL ++F+MKD+G A VIL I
Sbjct: 154 EADKCVYYRHDGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNI 213

Query: 173 KLTQSIDGITLSQSHYIEKSILEKYGYSNCRIASTTYDPKVALVKNS*GVPVSQLRY 3
           KL +  +GITL QSHY+EK IL ++GY + + + T YDP + L+KN   +  +QL Y
Sbjct: 214 KLIRGENGITLLQSHYVEK-ILNRFGYIDSKPSPTPYDPSLLLLKNK-RIAKNQLEY 268


>gb|AAX92916.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
          Length = 713

 Score =  224 bits (571), Expect = 6e-57
 Identities = 109/177 (61%), Positives = 139/177 (78%)
 Frame = -3

Query: 533 FLHGELEEEIYMDQPEGFVASGNERKVCKLIKSIYGLKQAPRDWHKKFDETVLESEFVVN 354
           FL+GEL+EEIYMDQP+GFV  G E KVCKL+KS+YGLKQAP+ WH+KFD+T+  + FVVN
Sbjct: 300 FLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFVVN 359

Query: 353 ESDKCVYYMVKGSECVILCLYVDDILLFGTNIEIINETKAFLKRHFEMKDMGEASVILGI 174
           E+DKCVYY   G E VILCLYVDDIL+FGTN+E+INE K+FL ++F+MKD+G A VIL I
Sbjct: 360 EADKCVYYRHGGGEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNI 419

Query: 173 KLTQSIDGITLSQSHYIEKSILEKYGYSNCRIASTTYDPKVALVKNS*GVPVSQLRY 3
           KL +  +GITL QSHY+EK IL ++GY + + + T YDP + L KN   +  +QL Y
Sbjct: 420 KLIRGENGITLLQSHYVEK-ILNRFGYIDSKPSPTPYDPSLLLRKNK-RIARNQLEY 474


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  224 bits (570), Expect = 8e-57
 Identities = 109/177 (61%), Positives = 139/177 (78%)
 Frame = -3

Query: 533  FLHGELEEEIYMDQPEGFVASGNERKVCKLIKSIYGLKQAPRDWHKKFDETVLESEFVVN 354
            FL+GEL+EEIYMDQP+GFV  G E KVCKL+KS+YGLKQAP+ WH+KFD+T+  + F VN
Sbjct: 907  FLNGELDEEIYMDQPDGFVLEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVN 966

Query: 353  ESDKCVYYMVKGSECVILCLYVDDILLFGTNIEIINETKAFLKRHFEMKDMGEASVILGI 174
            E+DKCVYY   G E VILCLYVDDIL+FGTNIE+INE K+FL ++F+MKD+G A VIL I
Sbjct: 967  EADKCVYYRHGGGEGVILCLYVDDILIFGTNIEVINEVKSFLSQNFDMKDLGVADVILNI 1026

Query: 173  KLTQSIDGITLSQSHYIEKSILEKYGYSNCRIASTTYDPKVALVKNS*GVPVSQLRY 3
            KL +  +GITL QSHY+EK IL ++GY + + + T YDP ++L KN   +  +QL Y
Sbjct: 1027 KLIRGENGITLLQSHYVEK-ILNRFGYIDSKPSPTPYDPSLSLRKNK-RIARNQLEY 1081