BLASTX nr result
ID: Angelica22_contig00035878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00035878
(391 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containi... 197 1e-48
ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containi... 195 3e-48
emb|CBI24302.3| unnamed protein product [Vitis vinifera] 190 9e-47
emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera] 189 2e-46
ref|XP_003541737.1| PREDICTED: pentatricopeptide repeat-containi... 180 1e-43
>ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 1 [Cucumis sativus]
gi|449442523|ref|XP_004139031.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like isoform 2 [Cucumis sativus]
Length = 517
Score = 197 bits (500), Expect = 1e-48
Identities = 88/129 (68%), Positives = 112/129 (86%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
SACSSI L+LGQWVHSY++SR D++++ NVGNAL+N+YVKCGNM++AI +F+ I+ KD+
Sbjct: 271 SACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKAIEHKDI 330
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHGSTPDDVTFIGLLSACSHAGLVNQGLMLFKA 360
VSWST+ISGLAMNG GK LFSLML+HG +PDD+TF+GLLSACSH GL+NQG+M+F+A
Sbjct: 331 VSWSTIISGLAMNGLGKQAFVLFSLMLVHGVSPDDITFLGLLSACSHGGLINQGMMVFEA 390
Query: 361 MDGVYGISP 387
M VY ISP
Sbjct: 391 MKDVYNISP 399
Score = 67.8 bits (164), Expect = 9e-10
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
SACSS+ L LG+ +H + R N + NAL++ YV+C + A +F + +DV
Sbjct: 169 SACSSLRCLKLGKAIHG-LRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDV 227
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHG-STPDDVTFIGLLSACSHAGLVNQG 342
VSW+TMI G A +G + + +F M+ G + P++ T + +LSACS ++ G
Sbjct: 228 VSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLG 282
>ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like, partial [Cucumis sativus]
Length = 472
Score = 195 bits (496), Expect = 3e-48
Identities = 88/129 (68%), Positives = 111/129 (86%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
SACSSI L+LGQWVHSY++SR D++++ NVGNAL+N+YVKCGNM++AI +F+ + KD+
Sbjct: 226 SACSSISALHLGQWVHSYINSRHDVIIDGNVGNALINMYVKCGNMEMAILIFKATEHKDI 285
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHGSTPDDVTFIGLLSACSHAGLVNQGLMLFKA 360
VSWST+ISGLAMNG GK LFSLML+HG +PDDVTF+GLLSACSH GL+NQG+M+F+A
Sbjct: 286 VSWSTIISGLAMNGLGKQAFVLFSLMLVHGISPDDVTFLGLLSACSHGGLINQGMMVFEA 345
Query: 361 MDGVYGISP 387
M VY ISP
Sbjct: 346 MKDVYNISP 354
Score = 66.2 bits (160), Expect = 3e-09
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
S CSS+ L LG+ +H + R N + NAL++ YV+C + A +F + +DV
Sbjct: 124 STCSSLRCLKLGKAIHG-LRMRTLNEENVILENALLDFYVRCAYLRSAENLFEKMPKRDV 182
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHG-STPDDVTFIGLLSACSHAGLVNQG 342
VSW+TMI G A +G + + +F M+ G + P++ T + +LSACS ++ G
Sbjct: 183 VSWTTMIGGYAQSGLCEEAVRVFQNMVHVGEAIPNEATLVNVLSACSSISALHLG 237
>emb|CBI24302.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 190 bits (483), Expect = 9e-47
Identities = 86/129 (66%), Positives = 109/129 (84%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
+ACSS+ LNLG+WVHSY+S+R DLV++ NVGNAL+N+Y KC +M +A+RVF + KD+
Sbjct: 284 TACSSLSALNLGRWVHSYISTRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDM 343
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHGSTPDDVTFIGLLSACSHAGLVNQGLMLFKA 360
+SWST+I G+AMNG+G H L FSLML+HG +PDDVTFIGLLSACSHAGLV QGL+ FKA
Sbjct: 344 ISWSTIIGGMAMNGHGMHALQFFSLMLVHGVSPDDVTFIGLLSACSHAGLVEQGLIFFKA 403
Query: 361 MDGVYGISP 387
M+ VYGI+P
Sbjct: 404 MNNVYGIAP 412
Score = 72.4 bits (176), Expect = 4e-11
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
SAC + + G+ +H Y S R N + NAL++ YVKCG + A +F + +DV
Sbjct: 182 SACCGLRAVRFGKAIHGY-SLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDV 240
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHG-STPDDVTFIGLLSACSHAGLVNQGLMLFK 357
+SW+TM+ GLA G + + +F M+ G + P++VT + +L+ACS +N G +
Sbjct: 241 ISWTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLGRWVHS 300
Query: 358 AMDGVYGISPD 390
+ Y + D
Sbjct: 301 YISTRYDLVVD 311
>emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]
Length = 725
Score = 189 bits (480), Expect = 2e-46
Identities = 86/129 (66%), Positives = 108/129 (83%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
+ACSS+ LNLG+WVHSY+S R DLV++ NVGNAL+N+Y KC +M +A+RVF + KD+
Sbjct: 218 TACSSLSALNLGRWVHSYISIRYDLVVDGNVGNALINMYAKCSDMYMAVRVFNELTHKDM 277
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHGSTPDDVTFIGLLSACSHAGLVNQGLMLFKA 360
+SWST+I G+AMNG+G H L FSLML+HG +PDDVTFIGLLSACSHAGLV QGL+ FKA
Sbjct: 278 ISWSTIIGGMAMNGHGMHALQFFSLMLVHGVSPDDVTFIGLLSACSHAGLVEQGLIFFKA 337
Query: 361 MDGVYGISP 387
M+ VYGI+P
Sbjct: 338 MNNVYGIAP 346
Score = 72.0 bits (175), Expect = 5e-11
Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
SAC + + G+ +H Y S R N + NAL++ YVKCG + A +F + +DV
Sbjct: 116 SACCGLRAVRFGKAIHGY-SLRSMDGDNIILDNALLDFYVKCGYLVSAKYLFMKMFRRDV 174
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHG-STPDDVTFIGLLSACSHAGLVNQG 342
+SW+TM+ GLA G + + +F M+ G + P++VT + +L+ACS +N G
Sbjct: 175 ISWTTMVGGLAQGGLCEEAVEVFQAMVKGGEAVPNEVTLVNVLTACSSLSALNLG 229
>ref|XP_003541737.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 293
Score = 180 bits (456), Expect = 1e-43
Identities = 84/129 (65%), Positives = 103/129 (79%)
Frame = +1
Query: 1 SACSSIGDLNLGQWVHSYVSSRDDLVMNRNVGNALVNLYVKCGNMDLAIRVFRGIKFKDV 180
SAC+SIG L+LGQWVHSY+ SR DLV++ N+GNAL+N+YVKCG+M + RVF I KDV
Sbjct: 42 SACASIGTLSLGQWVHSYIDSRHDLVVDENIGNALLNMYVKCGDMQMGFRVFDMIVHKDV 101
Query: 181 VSWSTMISGLAMNGYGKHVLPLFSLMLIHGSTPDDVTFIGLLSACSHAGLVNQGLMLFKA 360
+SW T I GLAMNGY ++ L LFS ML+ G PD+VTFIG+LSACSHAGL+N+G+M FKA
Sbjct: 102 ISWGTFICGLAMNGYERNTLELFSRMLVEGVEPDNVTFIGVLSACSHAGLLNEGVMFFKA 161
Query: 361 MDGVYGISP 387
M YGI P
Sbjct: 162 MRDFYGIVP 170