BLASTX nr result
ID: Angelica22_contig00035811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Angelica22_contig00035811
(334 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containi... 157 8e-37
emb|CBI23541.3| unnamed protein product [Vitis vinifera] 157 8e-37
ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|2... 144 1e-32
ref|NP_680717.2| tetratricopeptide repeat domain-containing prot... 136 2e-30
emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana] gi|7... 136 2e-30
>ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 599
Score = 157 bits (397), Expect = 8e-37
Identities = 74/111 (66%), Positives = 92/111 (82%)
Frame = +2
Query: 2 RKLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMT 181
R+LFD+IPEPD S N ML+CY++NAD+ +A +FF +M +D ASWNTMISGF +NGMM
Sbjct: 57 RQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMD 116
Query: 182 EARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLFGIAPVKSVVAWTAM 334
+AR+ F V+P RN V+WNAMISGYVESGDLD A +LF +APV+SVVAWTAM
Sbjct: 117 QARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAM 167
Score = 81.3 bits (199), Expect = 8e-14
Identities = 39/97 (40%), Positives = 61/97 (62%)
Frame = +2
Query: 2 RKLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMT 181
R+LF +P + +S N M+S YV + D++ A F R + +W MI+GF+K G +
Sbjct: 119 RELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIE 178
Query: 182 EARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLF 292
A K+F+ +P +N VTWNAMI+GY+E+ + +KLF
Sbjct: 179 LAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLF 215
>emb|CBI23541.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 157 bits (397), Expect = 8e-37
Identities = 74/111 (66%), Positives = 92/111 (82%)
Frame = +2
Query: 2 RKLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMT 181
R+LFD+IPEPD S N ML+CY++NAD+ +A +FF +M +D ASWNTMISGF +NGMM
Sbjct: 68 RQLFDRIPEPDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMD 127
Query: 182 EARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLFGIAPVKSVVAWTAM 334
+AR+ F V+P RN V+WNAMISGYVESGDLD A +LF +APV+SVVAWTAM
Sbjct: 128 QARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAM 178
Score = 81.3 bits (199), Expect = 8e-14
Identities = 39/97 (40%), Positives = 61/97 (62%)
Frame = +2
Query: 2 RKLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMT 181
R+LF +P + +S N M+S YV + D++ A F R + +W MI+GF+K G +
Sbjct: 130 RELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIE 189
Query: 182 EARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLF 292
A K+F+ +P +N VTWNAMI+GY+E+ + +KLF
Sbjct: 190 LAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLF 226
>ref|XP_002303374.1| predicted protein [Populus trichocarpa] gi|222840806|gb|EEE78353.1|
predicted protein [Populus trichocarpa]
Length = 569
Score = 144 bits (362), Expect = 1e-32
Identities = 69/111 (62%), Positives = 85/111 (76%)
Frame = +2
Query: 2 RKLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMT 181
++LF +IPEPD +S NTMLSCYV N++M A FF +M +D SWNTMI+GF +N M
Sbjct: 27 QELFVKIPEPDAVSYNTMLSCYVRNSNMERAQAFFEDMPIKDTPSWNTMITGFAQNQQMD 86
Query: 182 EARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLFGIAPVKSVVAWTAM 334
+AR F ++P +N VTWNAMISGYVE GDLD+A+KLF AP KSVVAWTAM
Sbjct: 87 KARDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAM 137
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
Frame = +2
Query: 2 RKLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMT 181
R LF +P + ++ N M+S YV D+++A F + F+ + +W MI+G++K G +
Sbjct: 89 RDLFLIMPTKNVVTWNAMISGYVECGDLDSALKLFEKAPFKSVVAWTAMITGYMKLGRIG 148
Query: 182 EARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKL------FGIAPVKSVVA 322
A + F+ +PE+N VTWNAMI+GY+E+ + VKL FGI P S ++
Sbjct: 149 LAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLS 201
>ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana] gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor gi|332658412|gb|AEE83812.1|
tetratricopeptide repeat domain-containing protein
[Arabidopsis thaliana]
Length = 656
Score = 136 bits (342), Expect = 2e-30
Identities = 63/110 (57%), Positives = 80/110 (72%)
Frame = +2
Query: 5 KLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMTE 184
+LFD+IPEPD S N MLSCYV N + A FF M F+D ASWNTMI+G+ + G M +
Sbjct: 114 QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEK 173
Query: 185 ARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLFGIAPVKSVVAWTAM 334
AR+ F + E+N+V+WNAMISGY+E GDL+ A F +APV+ VVAWTAM
Sbjct: 174 ARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAM 223
>emb|CAB10457.1| hypothetical protein [Arabidopsis thaliana]
gi|7268435|emb|CAB80955.1| hypothetical protein
[Arabidopsis thaliana]
Length = 851
Score = 136 bits (342), Expect = 2e-30
Identities = 63/110 (57%), Positives = 80/110 (72%)
Frame = +2
Query: 5 KLFDQIPEPDCISCNTMLSCYVNNADMNAAWIFFGEMGFRDIASWNTMISGFLKNGMMTE 184
+LFD+IPEPD S N MLSCYV N + A FF M F+D ASWNTMI+G+ + G M +
Sbjct: 114 QLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEK 173
Query: 185 ARKFFDVIPERNDVTWNAMISGYVESGDLDAAVKLFGIAPVKSVVAWTAM 334
AR+ F + E+N+V+WNAMISGY+E GDL+ A F +APV+ VVAWTAM
Sbjct: 174 ARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAM 223